Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_021539.2 Length=38275 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 4e-14 >seq3 Length=500241 Score = 91.5 bits (100), Expect = 4e-14 Identities = 150/210 (71%), Gaps = 11/210 (5%) Strand=Plus/Plus Query 16515 ATCACTGTACACAATACGTACAATGATGCTACAGCACAAAATGAGA---CGGATTACTGT 16571 ||||| ||||| ||||||||||||||||| ||||| ||||||||| || || || Sbjct 301 ATCACAGTACATAATACGTACAATGATGCATCAGCAGAAAATGAGATATCGTAT--ATG- 357 Query 16572 AAGAACAACAATAATGAAGT-TAGTTTCCATGTCGCAGTAGATGATAAAGAAGCTATTCA 16630 | || |||||| ||| | |||| ||||| ||||||||||| |||||||| | || Sbjct 358 ATTGGGAATAATAATTCAGTGTCGTTT-CATGTTGCAGTAGATGACAAAGAAGCAGTACA 416 Query 16631 AGTCGTTCCTTTTAATAGAAATGCGTGGCACTGTGGCGATGGTGGAAATGGATATGGAAA 16690 || ||| ||| || | ||||| ||||| || | || ||| || ||| |||| || Sbjct 417 AGGTATTCTGTTTGATCGTAATGCTTGGCA---TGCAGGTGATGGTAACGGAAATGGTAA 473 Query 16691 CAGGAATACCGTCGGTGTAGAAATCTGTTA 16720 | || | |||| || ||||| || || Sbjct 474 TCGTAAATCTATCGGAGTGGAAATTTGCTA 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122350488382330