Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 3e-12 seq4101 84.2 1e-11 seq2763 84.2 1e-11 seq2489 84.2 1e-11 seq69 84.2 1e-11 seq9 84.2 1e-11 >seq1 Length=1156483 Score = 86.0 bits (94), Expect = 3e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 1155746 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 1155688 Query 66772 ACAATCCACCAGTTACA 66788 | ||||| ||||| Sbjct 1155687 ATGGCTCACCATTTACA 1155671 >seq4101 Length=257 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 251 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 193 Query 66772 A 66772 | Sbjct 192 A 192 >seq2763 Length=485 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 417 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 475 Query 66772 A 66772 | Sbjct 476 A 476 >seq2489 Length=589 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 521 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 579 Query 66772 A 66772 | Sbjct 580 A 580 >seq69 Length=88854 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 601 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 543 Query 66772 A 66772 | Sbjct 542 A 542 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 88015 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 87957 Query 66772 A 66772 | Sbjct 87956 A 87956 >seq9 Length=252781 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 66712 TTAACTCAGTTGGTTAGAGTATCTCACTTTTAATGAGAGGGTCGAAGGTTCGAGTCCTTC 66771 ||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct 29549 TTAGCTCAGTTGGT-AGAGCATCTGACTTTTAATCAGAGGGTCGAAGGTTCGAGTCCTTC 29607 Query 66772 A 66772 | Sbjct 29608 A 29608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231520635053975