Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_021801.1 Length=42902 Score E Sequences producing significant alignments: (Bits) Value seq9 125 2e-24 >seq9 Length=252781 Score = 125 bits (138), Expect = 2e-24 Identities = 208/298 (70%), Gaps = 8/298 (3%) Strand=Plus/Plus Query 5692 GTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGCA 5751 |||||||||||||||| ||||| || ||| | ||| | | |||||| ||||| Sbjct 22227 GTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGCT 22286 Query 5752 TCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGAC 5811 | || || ||||| || || ||| ||||| | ||| ||||| ||||| || || ||| Sbjct 22287 ACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGAC 22346 Query 5812 TTTATTAATATCATCGTATTTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCT--- 5868 ||||||||| | ||| ||||||||||| |||| || |||| ||| | Sbjct 22347 TTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACG-TAGCAAAT---TATTTGAA 22402 Query 5869 -AAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGGAATTATGAAAATAAGGA 5927 ||||| || | ||||||||||| | | ||||| || ||||| || | || Sbjct 22403 AAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAAGA 22462 Query 5928 AGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCG 5985 ||| |||||||||| || || |||||| |||| || || | ||||||||||| ||| Sbjct 22463 TGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCG 22520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137155931009760