Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_022761.1 Length=146193 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 4e-14 >seq6 Length=382643 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 35811 AATCCAAGTATGAAAGTAATAGCAGTAGATCCAAATGTTATACCCTTAGGTAGTCGAGTA 35870 ||||||| |||||| |||| ||||| ||||||| ||| || || |||||| |||| Sbjct 339040 AATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTAGGTTCAAAAGTA 339099 Query 35871 CATGTTGAGGGTTATGGTTATGCAATCGCAGGAGATACCGGAGGAGCCATCAAAGGTAAT 35930 ||||| ||||| || |||||||| || ||||| || ||||| || ||||||||| Sbjct 339100 TGGGTTGAAGGTTACGGAGTAGCAATCGCTGGTGATACTGGTGGAGCTATTAAAGGTAAT 339159 Query 35931 AAGATTGAC 35939 || || ||| Sbjct 339160 AAAATCGAC 339168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467657767876600