Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_022914.1 Length=43394 Score E Sequences producing significant alignments: (Bits) Value seq9 116 1e-21 >seq9 Length=252781 Score = 116 bits (128), Expect = 1e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 33248 TTTCACTTTAGCTGTTAATAGAACATTCACAAATGCACAAGGCGAGCGTGAAGCAGACTT 33307 ||| || |||||||| ||| | |||| | ||| ||||| ||||||||||| ||||| Sbjct 22289 TTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTT 22348 Query 33308 CATCAATGTAGTTGTTTTTCGTAAACAAGCAGAAAATGTAAACAACTATTTATTCAAAGG 33367 || ||| || | | ||||||||||||||||| ||| || ||||| ||||| Sbjct 22349 TATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGG 22408 Query 33368 TCATTTAGCTGGTGTTGATGGTCGTATACAATCACGTAGTTACGA-AAACAATGAAGGCA 33426 | ||||| || || ||||| ||| | ||| | |||| |||||| |||| || || | Sbjct 22409 TAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAATTACGAGGGACAA-GATGGTA 22467 Query 33427 AACGAATATTCGTTACCGAAGTAGTAGCGGACAGTGTTCAATT 33469 |||| ||| ||| || ||||| | ||||| || || ||||| Sbjct 22468 AACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATT 22510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138730229210040