Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_023500.1 Length=43301 Score E Sequences producing significant alignments: (Bits) Value seq8 143 7e-30 >seq8 Length=318055 Score = 143 bits (158), Expect = 7e-30 Identities = 274/399 (69%), Gaps = 10/399 (3%) Strand=Plus/Plus Query 61 CATGATTATAATATTGAAGACACGATTGAAGCGGGAATTGTATTGCAAGGCACAGAAATA 120 ||||||||| || ||||| || ||||| || |||| | ||||| || ||||| Sbjct 149982 CATGATTATTTCATCGAAGAAACATACGAAGCAGGGCTTGTCCTTCAAGGAACGGAAATT 150041 Query 121 AAATCAATTCGCCGAGGTAGTGCTAACCTTAAAGATAGTTATGCGCAAGTTAAAAACGGT 180 || || |||||| || | | ||| | |||||| | ||| | || | || ||| Sbjct 150042 AAGTCGATTCGCGCTGGACGCGTAAACTTGAAAGATGCGTTTGCACGTGTACATAATGGT 150101 Query 181 GAAATGTATTTGAATAATATGCATATAGCACCATACGAAGAAGGGAATCGTTTTAATCAC 240 ||| | | | |||||||||| || | |||||| ||||||||||||| || || Sbjct 150102 GAAGTATGGGTTCATAATATGCACATTAATACGTACGAACAAGGGAATCGTTTCAACCAT 150161 Query 241 GATCCTCTTCGTTCTCGAAAATTATTATTGCATAAACGTGAAATCATTAAATTA---GGT 297 ||||| |||||| | |||||||| | |||||||| ||||| |||| || || Sbjct 150162 GATCCACTTCGTACGAGAAAATTACTTCTGCATAAAAAAGAAATTGATAAACTAGCGGGC 150221 Query 298 GATCAAACACGTGAAATTGGTTATTCGATTGTGCCGTTAAAGCTTTATTTGAAGCATGGA 357 | | || | |||| ||||| | | || || | | |||||||||| ||||| Sbjct 150222 GCTGCAAAA---GAAACAGGTTACGCATTAGTTCCACTTAGAATTTATTTGAAAAATGGA 150278 Query 358 CATTGTAAAGTATTG--CTTGGTGTCGCACGAGGTAAGAAAAAATATGATAAACGTCAAG 415 ||| |||| || | |||||| | ||| |||||| || |||| ||||||||||| | Sbjct 150279 -TTTGCAAAG-ATGGCACTTGGTTTAGCAAAAGGTAAAAAGCAATACGATAAACGTCACG 150336 Query 416 CTTTAAAAGAAAAAGCAGTCAAACGAGATGTTGCGCGCG 454 ||||||||| |||| || ||||| || |||| |||| Sbjct 150337 ATTTAAAAGAGAAAGAAGCTAAACGTGAAATTGCACGCG 150375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138432648452670