Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq4 116 2e-21 >seq4 Length=425142 Score = 116 bits (128), Expect = 2e-21 Identities = 198/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 37871 TCACGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCA 37930 ||||| ||| |||| || || ||||||||| | || ||| | || || || Sbjct 259768 TCACGTCGTTTAATCGTTTCTGCTTGGAATCCAGAAGATGTACCAAGTATGGCCTTACCG 259827 Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATAT 37990 ||||||||||| | |||||||| | ||||| ||||||| || |||||||||||| Sbjct 259828 CCTTGTCATACGCTATTCCAGTTTTATGTAGCAGATGGAAAGCTTTCTTGTCAGTTATAT 259887 Query 37991 CAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTT 38050 ||| | |||| ||| | ||| | || |||||||||| |||||||| || | | || Sbjct 259888 CAAAGAAGTGGTGACATATTCCTTGGAATTCCATTTAACATTGCAAGTTACTCACTACTA 259947 Query 38051 ACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGTGGT 38110 |||||| | | || ||||| ||| | ||||| || |||||||| || |||| Sbjct 259948 ACACATTTAATTGCACATGAATGCGGACTTGAAGTGGGAGAATTTGTTCATACAATTGGT 260007 Query 38111 GTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATT 38157 | | ||| | || | ||||| |||| |||| |||| ||||| Sbjct 260008 GATGCACACATTTATACAAATCATTTTGAACAAGTAGAAAAGCAATT 260054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248793088761685