Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_023599.1 Length=38772 Score E Sequences producing significant alignments: (Bits) Value seq4 1339 0.0 seq3 340 4e-89 seq5 170 5e-38 >seq4 Length=425142 Score = 1339 bits (1484), Expect = 0.0 Identities = 1109/1352 (82%), Gaps = 12/1352 (1%) Strand=Plus/Plus Query 36776 AATAAAGTCCGGCTAGAAAACTAGAGGACACCAATTCATTAAAGCAGCAATTCAAGCTGT 36835 |||| ||||||||||||||||||||||||||||||| ||| | ||| |||| ||||||| Sbjct 180984 AATACAGTCCGGCTAGAAAACTAGAGGACACCAATTT-TTAGAACAGTAATT-AAGCTGT 181041 Query 36836 TTTAGGAATAGGTGTCCT-TTTATTTTGAGAAGGGAGATGGGGAGATGAAGGTGTTGAGA 36894 |||| ||| |||||||| |||||||| | |||||||||||||| ||||||| | | | Sbjct 181042 TTTAAGAAATGGTGTCCTCTTTATTTTTAAAAGGGAGATGGGGAAATGAAGGCACTAAAA 181101 Query 36895 GATCAATTACGTGAATGGAAAA-GCAATCAAA-CAANNNNNNNNNNNNNNNNNNNNNNNA 36952 |||||||||| ||||||||||| |||||| || ||| | Sbjct 181102 GATCAATTACATGAATGGAAAAAGCAATCCAAGCAAGGAAAGAAGAAAAAACAA-----A 181156 Query 36953 AAGAGAAGT--TAAGCACTCGTCAAATTGAGGATTTAATGGAGGGGCATAGGCCTTGTTA 37010 ||||||| | |||| |||||| |||||||||||||||||| | |||||| |||||||| Sbjct 181157 AAGAGAAATATTAAGTACTCGTGAAATTGAGGATTTAATGGGGATGCATAGACCTTGTTA 181216 Query 37011 TGAACGAAGATATGGAGCAATAAGAGAAAAGTAATTTAAAAATAAAAAGGAGTGGTCTGG 37070 |||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 181217 TGAACGAAGACGCGGAGCATTAAGACAAAAGAAATTTAAAAATAAAAAGGAGTGGTCTTA 181276 Query 37071 AATGACTAAGCAATTATCTTTCTTACCAAAAATCGATAGAGCAGCAACGCAAGAGCAATT 37130 |||||||| ||||||||||| ||||||||||||||||||| ||||||||| | |||| Sbjct 181277 CATGACTAAACAATTATCTTTTTTACCAAAAATCGATAGAGTAGCAACGCAGAAAAAATT 181336 Query 37131 AGAGGGGATTTTGGAAAGTGTACGTATATATAAGCAATTTGGAATGATACGTAAGGAAAT 37190 ||| || || | |||| ||||||| |||||| || ||||||||||| ||| | ||||| Sbjct 181337 AGAAGGTGTTCTCGAAAATGTACGTTTATATAGACAGTTTGGAATGATGCGTGAAGAAAT 181396 Query 37191 GAAAGTCACTCCTTCTTATGAAAGGAGAGAGCATGGTCCTACACATGCAGTTGGCAAACC 37250 ||||||||||||||||||||||| ||| | || || |||||| ||| || || || || Sbjct 181397 GAAAGTCACTCCTTCTTATGAAATTAGATATCACGGACCTACAAATGATGTAGGAAAGCC 181456 Query 37251 GTTAGAAGATGTAGCAATCTCTAATATTCAACAAAGCAAGCGTGAAGAATGTTTAGAGAA 37310 |||||||||||||| || |||||||||| ||||| | | ||||| || | || | Sbjct 181457 ATTAGAAGATGTAGCGATGGCTAATATTCAGCAAAGTGAAAGAGAAGAGTGGATTAAGCA 181516 Query 37311 AATGGCATTTCGAGTTGAACAAGCATTAAGTCGATTCGGAAACAGTACAGCTGGAAAAAA 37370 || ||||||| |||| || | ||||| || || || | || ||||| | Sbjct 181517 AACATCATTTCGTATTGATCAGTTTCTTAGTCGTTTGGGTAATGGGCGTGCAGGAAAGGA 181576 Query 37371 TCAGAGGGACATTATAGTTAAACGGTATTTAGAAGACGAAGATGTGTGCGATTATATGGT 37430 ||| || |||| || |||| || ||||||||||| |||||||| || || |||||||| Sbjct 181577 TCAAAGAAACATCATTATTAAGCGTTATTTAGAAGATGAAGATGTATGTGACTATATGGT 181636 Query 37431 GTATAACGAAATTGGCATGAGTGAACGTACGTATCGACGTGTGAAAGCTAGAGCGTTTTA 37490 ||||||||||| ||||||||||| ||||| ||||||||| | || || |||| ||||| Sbjct 181637 ATATAACGAAATCGGCATGAGTGAGCGTACTTATCGACGTATTAAGGCGAGAGTATTTTA 181696 Query 37491 TAAATTGGCCTTTGCTCTTAGATTAGAAGTTTATGAAACTGAAGAAACTGGAGGGAATGA 37550 ||| | || |||||||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 181697 CAAACTTGCTTTTGCTCTTAGATTAGAAGTTTATGAGACTGAAGAAACTAGAGGTAATGA 181756 Query 37551 ATCATGAATTTTGTTCAGCCCATACGTGATCCAGAGCAAATACAACAAATCAAAGAATAT 37610 || ||||||||||||||||| ||||||||||||||||||||||| || | ||||| ||| Sbjct 181757 ATAATGAATTTTGTTCAGCCAATACGTGATCCAGAGCAAATACAGCATTTGAAAGACTAT 181816 Query 37611 TTAAAAGAAAAGAATGCACGTAACTATATTTTATTTGTAATGGGAATCAATACAGGGTTA 37670 || || ||||||| |||||| || ||| | || | ||||||||||||||||| | Sbjct 181817 TTTAAGGAAAAGAGCTTACGTAATTACATTCTCTTCATTATGGGAATCAATACAGGTCTG 181876 Query 37671 CGTATCAGTGATATTTTAAAACTAAAGGTTGGAGATTTAAAAGGTAGTCATATCTCAATG 37730 | ||| |||||||| ||||| ||||| |||||| | |||||||||||||| || ||| Sbjct 181877 AGAATCTCGGATATTTTGAAACTGAAGGTAGGAGATGTCAAAGGTAGTCATATATCTATG 181936 Query 37731 CGAGAAATGAAGACAGGTAAGCAGAAACGCATACAAATAACAGCAGCACTAAAGAGAGAG 37790 |||||| ||| ||||| || |||||||| |||||||| || ||||||||||| ||||| Sbjct 181937 AGAGAAAAGAAAACAGGGAAACAGAAACGAATACAAATTACTGCAGCACTAAAAAGAGAA 181996 Query 37791 CTTCGATGGTTTAATGAAAATAGAGAAGATGATGAGTACCTATTAAAAAGTAGGCAGGGA 37850 ||| |||||| | |||| | ||||||||| ||||||||||||| ||||||| || || Sbjct 181997 CTTAAATGGTTCATTGAAGAAAGAGAAGATAATGAGTACCTATTGCAAAGTAGACAAGGG 182056 Query 37851 AAAAATCGTCCAATCGGTCGTAGTATGGCATATAAGATACTAAGTGGAGTGGCAGCAGAG 37910 | |||||||| || || ||||| ||||| ||||||||| ||||||||| || ||||| Sbjct 182057 AGGAATCGTCCTATTGGGCGTAGCATGGCGTATAAGATATTAAGTGGAGCAGCGGCAGAA 182116 Query 37911 TTCGGATTAGATGAAATAGGAACACATACACTAAGAAAGACGTACGGTTATCATATGTAC 37970 |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||| Sbjct 182117 TTCGGATTAGATGAAATAGGCACACATACCTTAAGAAAGACGTACGGGTATCATATGTAC 182176 Query 37971 ATGCAAACGAAAAACATAGCATTACTTATGGAGATATTCAATCATTCGTCAGAGAAGGTC 38030 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct 182177 ATGCAAACGAAAAACATAGCATTACTCATGGAGATATTCAATCACTCGTCAGAAAAGGTC 182236 Query 38031 ACGTTACGTTATATAGGTGTAAACCAAGATGCAATGGATAAAGCAATGACTAGGTTTAAA 38090 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 182237 ACATTACGTTATATAGGTGTAAATCAAGATGCAATGGATAAAGCAATGACTAGGTTTAAA 182296 Query 38091 ATCTAATCATTGCttttttctttttAAATCTA 38122 |||||||||||||||||||||||||||||||| Sbjct 182297 ATCTAATCATTGCTTTTTTCTTTTTAAATCTA 182328 Score = 360 bits (398), Expect = 5e-95 Identities = 482/655 (74%), Gaps = 28/655 (4%) Strand=Plus/Plus Query 38120 CTATACAGTTACTCATAAATTTCGTACTGTGTAACTCAAAAGGGAAAGTATTATAAAGTC 38179 |||||||||||||||||| ||||| ||||||||||||||||| |||| | || || | Sbjct 183392 CTATACAGTTACTCATAATTTTCGCACTGTGTAACTCAAAAGAGAAAATTAAATGAAACC 183451 Query 38180 AATGATAGCAAGGGCTGTAGCGTTTGCCTCAGTTACACACAATTAAACATATGGGTAATT 38239 ||| ||| |||||| | |||| | ||||||||||||||| || |||||||||| | Sbjct 183452 AATAATACCAAGGGATTCAGCGAAGGGGTCAGTTACACACAATATAAGATATGGGTAAGT 183511 Query 38240 GGAAGGTATAAAA-TATGCACATGACGTATAAAGGTTA-TATAGAATGAATGAGAGGTGG 38297 || || ||| || ||| | ||| ||||| | | | |||| |||| | | | | | Sbjct 183512 GGCAG-TATCAAGGTATCGA-ATGGTGTATATACATAAATATAAAATGCAAGGGGGAGGT 183569 Query 38298 AACAGA---TGATGTG---TGAAGAGTTGTTACAAGCATTGGTTCAATATCAAATGCAGC 38351 || | | |||| |||||| | ||| ||| | | || |||| ||| | | Sbjct 183570 AATTGTGATTCATGTTAAATGAAGAACTATTAGAAGTAATAATTAAATACAAAAGGAATA 183629 Query 38352 AAGGAGAAAAGCCAAACACATTAAGGTTAAACCAAGATTACTATAAAACAGTATTAGAGC 38411 ||| ||| || | | |||| | |||| | | |||| | || || | |||| Sbjct 183630 CTGGAAGAAATCCTGATATGTTAAAGCTAAATCCAAATTATTTTAGAAATATTCTAGAAG 183689 Query 38412 AATTAGCTTACCCTGATTGGCTAATTGAAAAGAAAATTA-AGAACTTGGATCAGACGTTT 38470 |||| ||| || ||||| | ||| |||||||||| | |||| | || | | || | Sbjct 183690 AATTGAATTATCCACATTGGATTATTAAAAAGAAAATGACAGAAAT--GAAAAAAAGTAT 183747 Query 38471 CT-CGGGGTTGAAGTAGAACTGACAAGTGAAGTGGAAACTTTTGAAATGAGGAGGATaaa 38529 | ||| || ||| ||| | ||| || |||||||| ||||| | || || Sbjct 183748 ATTCGGAGTACCAGTGGAATTAACAGATGCAGTGGAAAAATTTGAGCT-------ATGAA 183800 Query 38530 aaaaGTGGCAGAATTTTGACCGCTTTTTGGCAGGAAAAAGGCCGACGTTTTTTATAAA-- 38587 || ||||||| | ||||||||||||||||||||| | || ||| ||| || Sbjct 183801 AACGTTGGCAGAGTCGTGACCGCTTTTTGGCAGGAAATGTGTCG--GTTATTTTGGAATT 183858 Query 38588 AGCATGTTATATTTGTATTATGAGAAGTGGCGGAAAACACAACTCACTATGTTTTTCTTG 38647 | | ||||||||||||||| || |||||||||||||||||||||||||||||| || || Sbjct 183859 AACGTGTTATATTTGTATTGTGGGAAGTGGCGGAAAACACAACTCACTATGTTGTTTTTA 183918 Query 38648 AA-TTCTAAACGGTTCGTAATGACGGCACATAAAATCCGAAACCAGCAGATGGTACTGAT 38706 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 183919 AAATTCTAAACGGTTCGTAATGACGGCACATAAAATCCGAAACCAGCAGATGGTAGTGAT 183978 Query 38707 TAAATGATACCGTCCATAAAAGGAGAGCTTTTGCTCTTCTTCCAGTTACTTAATA 38761 | ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 183979 TGAATGATACCGT-TAT-TAAGGAGAGCTTTTGCTCTTCTTCCAGTTACTTAATA 184031 Score = 105 bits (116), Expect = 2e-18 Identities = 120/156 (77%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 36132 AAAAAGAGCACCTTCGAACAGTGCTCTTTCCCGGAAGTGTATATTACATGG-ACTTGCAA 36190 ||||||||| |||||||| | ||| || |||| |||| || | ||| |||| || Sbjct 180101 AAAAAGAGCGCCTTCGAATGGCGCTTTTCTTCGGA-GTGTGTAGTGTATGATACTT-CAT 180158 Query 36191 GA-GGTTTTTAAGGAATAAAATGAATAAGCTCGCTCCTGAAAGGAAGAAGCCATACAATA 36249 || |||||||||| |||||||||||| ||| | |||||| || | || | |||||| Sbjct 180159 GAAGGTTTTTAAGAAATAAAATGAATGAGCCTACAACTGAAAAGATGCGGCTACACAATA 180218 Query 36250 ACATATGAAAACGTCGTCGCAGGAGTGACAATGAAA 36285 ||||||||||| | || | |||||||||||||||| Sbjct 180219 ACATATGAAAATGCTGTAGTAGGAGTGACAATGAAA 180254 Score = 98.7 bits (108), Expect = 2e-16 Identities = 139/189 (74%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 35842 AAATAATTTA-TAAAAGTTTCATTTTGTAGAAAATCAACAAAATAAAACGAGCACTTGTG 35900 ||||||| || | ||| ||||||||||| |||||||| |||||||||||||||||| | Sbjct 179554 AAATAATCTAATGAAAATTTCATTTTGTGGAAAATCACCAAAATAAAACGAGCACTCTGG 179613 Query 35901 CCAGAGTGCCCGTTTTATAAGATGACATCATTTATTA-TGTTATGTTTGTGAGTCATGAA 35959 | ||||| || ||| || || | | || || ||||||||||||||| ||||| Sbjct 179614 CATAAGTGCTCG-CTTAAAAAAT-ATTCTGTGTACTAGGGTTATGTTTGTGAGTTATGAA 179671 Query 35960 CAATTAAATGAGTCGAAAAGTAAGGTTCGAAATAGTTTATGTACCTGTTAATAAATAGGT 36019 | | |||| | ||||||||||| ||||||||||| | | | ||||| ||| Sbjct 179672 CCCAT-GATGAACTGTGAAGTAAGGTTCAAAATAGTTTATTCATTTTAGAGTAAATGGGT 179730 Query 36020 GCTTGTACT 36028 | |||||| Sbjct 179731 ACCTGTACT 179739 >seq3 Length=500241 Score = 340 bits (376), Expect = 4e-89 Identities = 350/455 (77%), Gaps = 2/455 (0%) Strand=Plus/Plus Query 20061 AAAAAAGGGGATGTTCAATAATGGAAATTAGAAAAAAGTTAGTTGACCCAAGTAAATATG 20120 |||||||| ||| ||| ||||||||||||||||||| ||||| || ||||||||||||| Sbjct 206 AAAAAAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATG 265 Query 20121 GTACAAAGTGCCCTTATACAATGAATCCAGAATTTATCACAGTCCACAATACGTATAATG 20180 ||| |||||| || ||||||||| |||||||| |||||||| || |||||||| |||| Sbjct 266 GTATAAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATG 325 Query 20181 ATGCGCCAGCTGAGAATGAAATTGCTTATATGATACGAAATAATAATGAGGTGTCATTCC 20240 |||| |||| || ||||| || | |||||||| | ||||||||| ||||| || | Sbjct 326 ATGCATCAGCAGAAAATGAGATATCGTATATGATTGGGAATAATAATTCAGTGTCGTTTC 385 Query 20241 ACATTGCAGTAGACGATAAAGAAGCTGTACAAGGCTTACCTTTAGAACGAAATGCATGGG 20300 | |||||||||| || |||||||| |||||||| | | || || || ||||| ||| Sbjct 386 ATGTTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGC 445 Query 20301 CTTGTGGAGATGGGAATGGTTCAGGCAACAAGAAAGTCGATTGGTGTGGAAATCTGTTAT 20360 | || ||||| || || || || | || || || || |||||||| || ||| Sbjct 446 ATGCAGGTGATGGTAACGGAAATGGTAA-TCGTAAATCTATCGGAGTGGAAATTTGCTAT 504 Query 20361 TCTTTAAGCGGCGGGGAAAGATA-TATAAAGCAGAAAATAATGCAGCTATCGTTGTAGCC 20419 ||| ||||||| ||||| ||||| || || || || |||||||||| || ||| | || Sbjct 505 TCTCTAAGCGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCT 564 Query 20420 AAATTAATGAAACAATACAACATTCCAATAAGTAAAGTTCGCACACACCAATCGTGGAGT 20479 | ||||||||||||| ||| || || || ||||| || || ||||| ||||||||||| Sbjct 565 CAGTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGT 624 Query 20480 GGAAAATACTGCCCGCATCGTATGTTAGCGGAAGG 20514 ||||| | ||||| ||||| ||| | | ||||| Sbjct 625 GGAAAGCATTGCCCACATCGAATGCTCGATGAAGG 659 Score = 208 bits (230), Expect = 2e-49 Identities = 223/292 (76%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 19281 ATGCATTCACTCAGAAAAGGTTTGTCTCATAGTATATAGGGATTGCCTTATTAAGATTTC 19340 ||| |||||| || ||| |||||||||| |||||| |||| ||||||||| Sbjct 268405 ATGTATTCACAGGTAAGAGGGTTGTCTCATAATATATATAGATTTTTCTATTAAGATGA- 268463 Query 19341 AAAAAGGATGTGAACGTATGGAAGACGTATATGTAAAAATCGACAGCTTAAAAGCAGAGC 19400 | | ||| |||||| |||||||| || || | ||||| || || | || || |||| Sbjct 268464 ACAGAGGGTGTGAATAAATGGAAGATGTTTACGCTAAAATTGATAGTCTCAAGGCGGAGC 268523 Query 19401 AAAAAGAGATCATGCGAGATATTCGTAATTTAGAAACTCGTACAACGATAAACGAAAAAG 19460 ||||||| || ||| |||| ||||||||||||||||| ||||| || || || || |||| Sbjct 268524 AAAAAGAAATTATGAGAGACATTCGTAATTTAGAAACGCGTACCACTATTAATGAGAAAG 268583 Query 19461 ATATTTCTACCATCAATCAGCAATTAGAAAATATCAGTCTAAATACCAC-AGGATTTTAC 19519 |||| | || |||||| ||||||||||||| || ||| ||| || || ||||||| | Sbjct 268584 ATATAGCAACAATCAATAAGCAATTAGAAAAAATAAGTACAAACACAACTTGGATTTTGC 268643 Query 19520 GAATTGTTATCAGTGCAATTGTCATGGCAGTTTTAGGTTTGGTATTTAAAGG 19571 ||||| |||| ||||| || | ||| |||||||||| ||| |||| ||||| Sbjct 268644 GAATTATTATTAGTGCGATAATAATGTCAGTTTTAGGATTGATATTAAAAGG 268695 >seq5 Length=406804 Score = 170 bits (188), Expect = 5e-38 Identities = 153/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 20583 AACCATCTAACAATGGTGTAGGTATTGTTACGATTACAGCGGATGTCTTACGTGTTCGTA 20642 || |||| ||| | ||||||||| | ||||| || | || ||||| || |||||||||| Sbjct 271988 AATCATCAAACGAGGGTGTAGGTGTAGTTACTATAATCGCTGATGTATTGCGTGTTCGTA 272047 Query 20643 CAGGACCAGGAACAAATTATGGCATTGTAAAGAATGTGTACCGAGGGGAACGCTATCAAT 20702 | || |||||||||||||| |||||||| || || ||||| | ||| ||| ||||||| Sbjct 272048 CCGGCCCAGGAACAAATTACGGCATTGTGAAAAACGTGTATCAAGGTGAAAAATATCAAT 272107 Query 20703 CTTGGGGCATTCAAAATGGTTGGTATAATGTTGGCGGAAATCAATGGGTATCTGGGGAGT 20762 | | || | || ||||||||||||||||||| |||||||||||||| ||||| || | Sbjct 272108 CATTTGGATATAAAGATGGTTGGTATAATGTTGGTGGAAATCAATGGGTTTCTGGTGAAT 272167 Query 20763 ATGTGAGGTTTG 20774 |||| | ||||| Sbjct 272168 ATGTTACGTTTG 272179 Score = 140 bits (154), Expect = 8e-29 Identities = 123/151 (81%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 37963 ATATGTACATGCAAACGAAAAACATAGC-ATTACTTATGGAGATATTCAATCATTCGTCA 38021 |||||||| ||| || || || ||||| |||| | ||||| |||||||||||||| Sbjct 214311 ATATGTACGTGCCGACAAAGAATATAGCCATTATTAATGGATATATTCAATCATTCAAGT 214370 Query 38022 GAGAAGGTCACGTTACGTTATATAGGTGTAAACCAAGATGCAATGGATAAAGCAATGACT 38081 || || || || || | ||||||| ||||| | |||||| |||||||||||||||||| Sbjct 214371 GAAAAAGTAACAATAAGATATATAGATGTAATC-AAGATGTGATGGATAAAGCAATGACT 214429 Query 38082 AGGTTTAAAATCTAATCATTGCttttttctt 38112 || |||||||||||||||||| ||||||||| Sbjct 214430 AGATTTAAAATCTAATCATTGTTTTTTTCTT 214460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123940785548060