Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq42 1009 0.0 seq9 107 5e-19 seq5 107 5e-19 >seq42 Length=115759 Score = 1009 bits (1118), Expect = 0.0 Identities = 1647/2369 (70%), Gaps = 8/2369 (0%) Strand=Plus/Minus Query 23453 AATAAAATAATCGTTTTCCGCATCATCCCGCATGCTGACGTCACAAATAACAATAAACGC 23512 || ||||| | || | || || || || ||||| || || | ||||| | || || Sbjct 41493 AACAAAATGGTTGTATATCGGATTATTCCTCATGCGGATGTATCTAATAATACAAAGCGT 41434 Query 23513 TTATGGCGGGCAATTTACAAAATGTATGAGATGTACGAATCACCAATAAGCCGCTTGGAA 23572 ||||||||||| || | || |||||||| ||||||||| ||| || | ||| Sbjct 41433 TTATGGCGGGCGATCCATAAGATGTATGAAATGTACGAAAGTATGGGAAGTCGTATAGAA 41374 Query 23573 CGAAACGGCTTTAAAATCACATACAGGGAAAAAGATTATTTTTGGTTTGACGTTATTTTT 23632 |||| || ||| | | || | ||||| || ||||| |||||||| ||| |||| Sbjct 41373 AGAAAAGGAATTACATTTCATTATCGTGAAAAGGACTATTTCTGGTTTGATGTTGTTTTC 41314 Query 23633 AGGCAAGTCAACGGCGAGAAGAAAATTGAATTTTATATTGCAACAAGTGAATTCCAAGCG 23692 | || | || ||| |||||||||||||||||||| | ||||| || |||| ||||| Sbjct 41313 AAACAGGAAAAGGGCCAGAAGAAAATTGAATTTTATGTAGCAACTAGCGAATATCAAGCA 41254 Query 23693 CaaaaactaaaacgaaaaattgaaaacaaaaTGAGCGTGACTATCACCGAGGCGAGCATT 23752 ||| || ||| ||||| | || ||||||||||| ||||| || | || ||| || Sbjct 41253 TTAAAGCTCAAAAGAAAACTAGAGAACAAAATGAGTGTGACAATTAAGGAAGCGGAAATA 41194 Query 23753 AAGGACATACAAATACCGGTGGAAAATACAATTGTTCAAGAAATGCGCTATTTAAAGCAT 23812 || | ||||| | ||||||||||| || ||||||||||| ||||| || ||| Sbjct 41193 TCAGATTTGCAAATTTCTAATGAAAATACAATCGTACAAGAAATGCGATATTTGAAACAT 41134 Query 23813 GACATTTTTAGCCTAAACACCAATAGCAACGATGTAANNNNNNNNNNNNNNNNNATTTTA 23872 || || ||| | |||| || |||||||||||| || |||||| Sbjct 41133 GATATCTTTTCCTTAAATACAAATAGCAACGATACAAAAACGCCTATTGGTAATATTTTA 41074 Query 23873 AGCACCATAGACGAATTACAATTCGATGGCGATTTTGCCCGGTTGAGCATTTGCGCCGAG 23932 || || || ||| || | ||||| || || || ||||| || || || Sbjct 41073 AGTGTTATTGATGAACTAAGTTATGATGGAGACATTTGTCGATTGAGTATCTGTAATGAA 41014 Query 23933 GCAGAGAATCGCCAAAAATGGGTTAAGACGGCCCAATGGGCATATGAGAAGGTAAGTAAG 23992 || || || || || |||||||| || | || ||||| ||| ||| ||| ||| Sbjct 41013 GCGGAAAACCGTCAGAAATGGGTGAAAAACGCTTCCTGGGCCATTGAAAAGTTAAAGAAG 40954 Query 23993 GGAAAAGTACCGCAGCGGGCCAATTTGAGCGGAAAACGGCTAATGACAGGGGCAAAGGTA 24052 || ||| ||| || |||| ||| ||||||| ||||| || | |||||||| || | Sbjct 40953 GGGAAACCACCCCAACGGGTTAATATGAGCGGCAAACGACTTGTAACAGGGGCTAAAATT 40894 Query 24053 GCCGTTGCCGCTATCATTAACGAAATAAATGATTTGCTCGTTGATACATTCCAAGCGTTT 24112 | ||||| ||| | ||||| |||||||||||||| | |||||||||||| ||||| Sbjct 40893 GGTGTTGCGGCTGTTATTAATGAAATAAATGATTTATTAACTGATACATTCCAGGCGTTC 40834 Query 24113 AGTAATGTCTTTTTCAAGAGTGACAAGGATTTT-GCAAGGGAGAAATTAATTAAAAAGGC 24171 || | ||||| || || || | ||| |||| | || | | ||||||||||| Sbjct 40833 TCGAACGCTTTTTTTAAATCAGATAAAAAATTTAGCAAAG-AGCACATCATTAAAAAGGC 40775 Query 24172 CCATGCATTGGAGGATGAAATTGGAGCAACCCGGTTTAACCATGAAAAGGGAAATTTGCC 24231 ||| || | | |||||| ||||| ||| || | | |||| || |||||| ||| Sbjct 40774 ACATACAATCGCTGATGAAGTTGGAACAAATCGAGTGAGTTATGACAAAGGAAATCAGCC 40715 Query 24232 CGTCTTTAAAACCCATATACGCATTGCGGCCCATTCAAAAGACCGATTAACCCGCGACAC 24291 || |||||||| | |||||| | || | ||||| | || || |||||| | || || Sbjct 40714 TGTTTTTAAAACGCGTATACGGGTGGCCTCACATTCCCATGATCGGTTAACCAGGGAGAC 40655 Query 24292 AATGGCCGAAACGTTGGCCCTTTCATTCCAAGATTTAAGCGAGGCCAACGAATTGCACGG 24351 ||||| ||||| || || ||||| | |||||| || | || ||| | || || Sbjct 40654 AATGGGGGAAACCTTAGCACTTTCTATGATGGATTTATCAGAAACGAATGAACTACATGG 40595 Query 24352 CGTTAAAATCCGAATTAATGGCCGCCGGGTTGCTGTTATCGAGGAATTGAATACATTACG 24411 ||| ||||| |||| | |||| | | | ||||||| |||||||| || Sbjct 40594 CGTAAAAATAAGAATGAGAAAACGCCAAACAGAAATATTACAGGAATTAAATACATT-CG 40536 Query 24412 ATTGAAC--GCCCGCACCAAGGCCGATGTGAACGTTAATTTAATGAGTACGGACGAAATG 24469 | | | || | || ||| ||| ||| || ||||| |||||||| || |||||| Sbjct 40535 AACTATCAAGCAAG-ACAAAGTTTGATCCGAATGTAAATTTGATGAGTACCGATGAAATG 40477 Query 24470 AGCAAATTAGCCCTAATGATGCCTAATAAAGATTTACAACGGAAATACGCCGATGCATTG 24529 ||||||||||| | |||||| ||||| || ||||| ||||| || ||||||||| Sbjct 40476 AGCAAATTAGCTTTGCAAATGCCTGTAAAAGAGTTGCAACGAAAATATGCAGATGCATTG 40417 Query 24530 AGCGTTAAAAAGCGGGTTGAGGTTGAAATACCGGCAGCGATGCGGGACGAAAACGGCATT 24589 || || |||||| ||||| |||| ||||| || |||||||| || || || || Sbjct 40416 AGTGTAAAAAAGAAAGTTGAAATTGAGATACCAGCGATTATGCGGGATGAGAAAGGAATA 40357 Query 24590 TATTTGGGCGTTGCCGAGGTAAAAGACGAAAAAATACCGGTTTATATACCGGTAAGCAAC 24649 | ||| || | | || | ||||| |||||||||| | ||||| || || || Sbjct 40356 TTTTTAGGACATTCGGAATTGAAAGATCAAAAAATACCAATCTATATGCCAATAGATAAT 40297 Query 24650 CCGGACGAATTTTTTAGAGCATATGTTTTCATTGGTGGCCAAGGAGCCGGGAAGGACACG 24709 || || | |||| ||||| || || || || || || || || || || || || || Sbjct 40296 CCAGATAATTTTTATAGAGGTTACGTCTTTATAGGAGGACAGGGGGCTGGTAAAGATACA 40237 Query 24710 GCCATAAAAAACTTTATTATTGAGGCCAATTTAAAACACAATATTAGCTTTGTCATACCT 24769 || || || || ||| ||||||||| ||| |||||| || ||||| ||| ||||||| Sbjct 40236 GCAATTAAGAATTTTGTTATTGAGGGAAATACAAAACATAAGATTAGTTTTATCATACCA 40177 Query 24770 GATGCGATATGCGAGGAAGGGGAGCGCGGCATGGCCGACGGTATCCGCGACGCTTTGCCG 24829 ||||| || || ||||| | ||| || ||||| ||||| || || || || || || Sbjct 40176 GATGCAATTGTAGAAGAAGGTGGGCGGGGGATGGCAGACGGGATTCGTGATGCATTACCA 40117 Query 24830 CCGGAGCGCATTATTGACCTAAATTTGAATGACGAGAACTATATACCGCCGATGGATTTG 24889 || || ||||||||| || |||| || ||| | ||||| || || | ||||| Sbjct 40116 CCAGAAAACATTATTGATCTGGATTTAAACGACAGTGATTATATCCCACCTCTAGATTTA 40057 Query 24890 ACCGAAGTAATAAAGGCGCTTGGACGAAACGGGGCAAGCCGTTTTGCTGATGAAATGATA 24949 || |||||||| | ||| || || ||||| || | ||||| ||||||||||| Sbjct 40056 ACAGAAGTAATTACAAAGCTAGGGCGGAACGGTGCTTCAAGATTTGCGGATGAAATGATT 39997 Query 24950 GACTTTTTGCAGATTGAAGGATTAAGCCGCTCCGAAAAATATTTAACCGACGCGGCCAAG 25009 || || |||| ||||||||||||||||| |||||||||||||| || |||||||| Sbjct 39996 GATTTCATGCAAATTGAAGGATTAAGCCGAAGTGAAAAATATTTAACGGATGCGGCCAAA 39937 Query 25010 GCGTCCGGGGGTAATTTATTGAATATCAAACGCATTATTGAGGATGAAAATTTTAGAGCG 25069 || || | | |||| ||||| ||||| ||||| || |||||| | ||| | | Sbjct 39936 GCAAGTAAAGGAAGTCTATTTAATATTAAACGTATTATAGAAGATGAAGACTTTCGGGTA 39877 Query 25070 GCCCGCATCGAGGAGTTAATACAAGAGGGCAACATTAGATTGGCCAATGAGTT-ATTGAG 25128 ||||| | || ||| | | || || || | | | || |||||| | || || Sbjct 39876 AATCGCATTCAAGAATTAGTGAATGAAGGGAATTTGCGTCTTGCGAATGAGCTGATACAG 39817 Query 25129 TTGGGGAACAAATGAGGATTTGGGCAATAAATGCGATGCGATTTTACACCGGCTCAACCG 25188 | ||||| ||||| | || || ||||| || ||| | || || | | | ||||| Sbjct 39816 T-GGGGAGATAATGAACAATTAGGGAATAAGTGTGATCCCATCATAACCAGATTAAACCG 39758 Query 25189 CTTTTTTGGCAATGATCGCTTATACGATATTTTCGCGCAGCCGCCGCTTAAGGAATTGGA 25248 ||||||||| ||||| | || || ||||| || || || || | || ||| | || Sbjct 39757 CTTTTTTGGGAATGAAAGATTGTATGATATCTTTGCACAAGACCCATTGAAAGAACTTGA 39698 Query 25249 TTTTAGAAAATGGATGCAAGAGGGCAAGGTTATCATTATCCGGGTACCAAACGGCCGAGG 25308 |||| | |||||||||||||| || |||||||| ||| | |||| ||||| | | || Sbjct 39697 TTTTGGTAAATGGATGCAAGAAGGAAAGGTTATTATTTTAAGGGTTCCAAATGCTAGGGG 39638 Query 25309 ATTGGGCGAGCATGCGGTTAAAACGATTGTTCATTGGATAACCTTAAAAACCTTTATGAC 25368 |||||| || ||||| || ||||| | ||||| ||||| || |||||||||| ||||| Sbjct 39637 ATTGGGGGAACATGCAGTAAAAACCCTGGTTCACTGGATCACACTAAAAACCTTCATGAC 39578 Query 25369 ACGGCTATTAATGACAAAAGAGGAACAGAAAAACGGCTGTTTTATCGTCTTTAATGAGCC 25428 || |||||||||| ||| | || || |||| || |||||| | |||||||| || Sbjct 39577 CAGGTTATTAATGACTAAAAAAGAGCAAGAAAATGGGGCGTTTATCATTTTTAATGAACC 39518 Query 25429 GGAACAATACGAAACGGAAGGCCTTTCTAAACTCATGGGCCGGATTGCAACCGAGGGAAG 25488 || ||||| |||| ||||| | ||||| | ||||| | | | || ||||| || Sbjct 39517 CGAGCAATATGAAAGTGAAGGATTAACTAAATTGATGGGTAGAGTGGGTACAGAGGGCAG 39458 Query 25489 AAAAGAACGATTAGGCAGCCTTTACGCTTTCCACCATTGGAACAAGTTAAAAACATCATT 25548 |||||| || |||| ||| | || || || |||||||||||||| || ||| | ||||| Sbjct 39457 AAAAGAGAGACTAGGAAGCATCTATGCATTTCACCATTGGAACAAATTGAAACCGTCATT 39398 Query 25549 ACAAGAGAATTTGCAGGGCGGCGGCGTCCAACAATTCCTTTTTATGAATGACTATACAAA 25608 |||||||||||| || || |||||| | || ||||| || |||||||| || ||||||| Sbjct 39397 ACAAGAGAATTTACAAGGTGGCGGCATACAGCAATTTCTATTTATGAACGATCATACAAA 39338 Query 25609 AACCTTTGATTTATCAAAACATCGGTTTGAGGATACTATACCATTGGAGGAGGCTTATAG 25668 || ||||| ||||| || |||| ||||||||||| || || | || | || |||| Sbjct 39337 GACATTTGAATTATCTAAGTATCGATTTGAGGATACAATTTCACTAGAACAAGCATATAA 39278 Query 25669 ATTGCCGGCGTATCATGCCATAATTAGTGTGAGGGCTGCCGGGGAATTGCAGCCGGCGTT 25728 | | || || |||| || || || ||||| || |||| || ||| |||| || |||| Sbjct 39277 AATACCAGCACATCACGCGATTATCAGTGTAAGAGCTGGGGGAGAAATGCAACCATCGTT 39218 Query 25729 TATTTGCCGGATGGCCCCACCGATAAAGCCGAAATATGATAACTCTTTTCTCACCAAGCG 25788 ||||| ||||| |||||| | ||||| ||||||||||| ||||| || || | Sbjct 39217 CATTTGTAAAATGGCGCCACCGGTTAAGCCAAAATATGATAATAGCTTTCTAACAAAAAG 39158 Query 25789 GCATGCCCAAATGTACGGGCGGCCATGGA 25817 |||| | | ||||| || || | |||| Sbjct 39157 GCATTCTCGCATGTATGGCCGATCCTGGA 39129 Score = 145 bits (160), Expect = 2e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22677 CATTTGCTGCCGGTATGCATAGCACTTTTGGGAGTATCCATAGCGCTATTATGAACGCAT 22736 ||||||| || || | | | || ||||| | | | ||||| || |||||||||| | Sbjct 42246 CATTTGCCGCGGGAGTTAACGGGACGTTTGGCAATGTTCATAGTGCCATTATGAACGGGT 42187 Query 22737 TTGACGCGGGGGTTGTCTTAATAATCATTTTCGCGGGCGCTGCTTGGGCATTGGGACACC 22796 |||| || || || || ||| | || || || ||||||| || ||||||||||| |||| Sbjct 42186 TTGATGCAGGCGTAGTTTTAGTTATTATCTTTTCGGGCGCGGCCTGGGCATTGGGTCACC 42127 Query 22797 GTACCAAGGCCATTGAAATACTTATAGGCGTTTGTTGCGGTTATATTTTGGCCCGGCATG 22856 |||| ||||| || ||||| | || || | ||||| || ||||| ||||| | |||| Sbjct 42126 GTACAAAGGCAATAGAAATTTTAATTGGTGCATGTTGTGGGTATATCTTGGCTAGACATG 42067 Query 22857 CCATTGATATTAGAGATTTTTTAAAGGGGATTTAA 22891 | |||| || ||||| ||||||||||| |||||| Sbjct 42066 CGGTTGACATAAGAGACTTTTTAAAGGGAATTTAA 42032 >seq9 Length=252781 Score = 107 bits (118), Expect = 5e-19 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094 |||||| || || | ||||| |||||||| || ||||| || ||||||||||| | Sbjct 22209 ATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCC 22268 Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154 | || || || || || || ||||| || || || || ||| ||| | || || ||| Sbjct 22269 AATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAA 22328 Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAAATGCG 29214 || ||||| || ||||| ||||| ||||| | ||||||||||| || ||||| | Sbjct 22329 GGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAAAACGTA 22388 Query 29215 GCGAACTATTTG 29226 || || |||||| Sbjct 22389 GCAAATTATTTG 22400 >seq5 Length=406804 Score = 107 bits (118), Expect = 5e-19 Identities = 202/293 (69%), Gaps = 13/293 (4%) Strand=Plus/Plus Query 19157 TGGTATAACTACTGTATAGCGAACGGGCTTGACATTCTCATTTATGAAACAAAGCGGACG 19216 |||||| | |||||||| | || || |||| | | ||||||||||||| || ||| Sbjct 271414 TGGTATCAGTACTGTATCGACAATGGAATTGAAGTATTAATTTATGAAACAATCCGTACG 271473 Query 19217 GAAGAACAGCAACGAAAATATGTTGCAGAAGGTAAATCAAAAACCATGCGCTCATACCAT 19276 | || || ||||| |||||||| |||| |||| |||| ||||||||||| || Sbjct 271474 GTCGAGCAACAACGTGAATATGTTCGTAAAGGAGCATCACAAACGATGCGCTCATATCAC 271533 Query 19277 TTAGTAGGCCAAGCGCTCGATTTTGTCCCAAT--CGT-AAACGGCAAAGCGGATTGGAAT 19333 |||||||| || || | |||||||| ||||| || || || | || ||||||||| Sbjct 271534 TTAGTAGGACAGGCATTAGATTTTGTTCCAATTCAGTCGAATGGTACAGAAGATTGGAAT 271593 Query 19334 GG--ATACGACCG---CCCGGAAATCAAAAAAGCCATTGCTTTTGCAAAGTCATTGGGCT 19388 || ||| | | | || ||| ||| ||| || ||| || | | |||| Sbjct 271594 GGCTATAATAAAGAACCGTGGGCATC-----AGCAATTCGTTATGCTAAACAAATTGGCT 271648 Query 19389 TCACATGGGGCGGCGATTGGAAAACATTAGTTGACAAGCCGCATCTACAATAT 19441 | ||||||||| || |||||| ||| || || | |||||| | |||||| Sbjct 271649 TTGAATGGGGCGGTGACTGGAAAGGATTTGTGGATAGCCCGCATTTGCAATAT 271701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124919922233600