Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq9 241 1e-58 >seq9 Length=252781 Score = 241 bits (266), Expect = 1e-58 Identities = 541/803 (67%), Gaps = 25/803 (3%) Strand=Plus/Minus Query 25994 GTAATCCATTCATTTTTAAAAGCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGC 26053 ||||| || | ||| |||| || || || || | || || ||||| | || ||| | Sbjct 242148 GTAATATATCCTTTTCTAAATGCTATTTCCTCTAAACAAGCTACCTTTAAACTTTGACGT 242089 Query 26054 TTCTCTATTGCATGAACAAATTGAGATGCTTCCA-TAA-GACTTTCATGTGTTCCTGTAT 26111 || || |||| | || ||||||||||||||| | ||| |||| | || || || | | Sbjct 242088 TTTTCAATTGTTTCAATAAATTGAGATGCTTCTAATAATGACT--CGTGCGTGCCAGAGT 242031 Query 26112 CCAGCCAAGTGAAACCTCTTCCTAGT-TTACAGACACGTA-AAGTCTTTTCTTTCCAG-T 26168 | | ||||| || |||| || || || || |||| || |||| | || | | Sbjct 242030 CTAACCAAGAAAAGCCTCGGCCAAGAATTTCA---ACGTGCAACTCTTGTAATTGTAAAT 241974 Query 26169 ACATCTCATTTATATCCGTAATCTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAG 26228 | | || ||||||||| |||||||| || || || | || || ||||||| |||| | Sbjct 241973 AAACCTTATTTATATCAGTAATCTCCAATTCTCCACGAGGTGATGGTTTAATATTCTTCG 241914 Query 26229 CTTTCTGTATAACAGAATTATCGTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttg 26288 | ||| ||||||| |||||| || || || || ||||| | || || | |||| Sbjct 241913 CAATCTCTATAACACGATTATCATAGAAATATAAACCTGTTACAGCATAATGTGACTTTG 241854 Query 26289 gtgtttttggtttttCTTCAATACTCACCACTGT---ACCTTCAGAATCAAACTCAACAA 26345 | || || || ||||||||| | | | ||||||| |||||||| |||| Sbjct 241853 GCTCTTGAGGCTTCTCTTCAATAGAAATAGCCTTCCCACCTTCA---TCAAACTCTACAA 241797 Query 26346 CACCAAATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAGCTCCACCATTCTTTT 26405 | ||||| | ||| ||||||||||| | ||| ||||||| | | || || ||||| Sbjct 241796 CCCCAAAACGTTCTGGATCATTTACATAATATCCAAAGACAGTTGCCCC----TTCTTGG 241741 Query 26406 CAATATGTTCTTTAGCAGAATCTAAAATGCTACCAAAACTCTGACCAAAGAATAAATTAT 26465 | ||||| || | ||| | | |||| || ||| |||||||||||| Sbjct 241740 C-----GTTCTGCGGCGTTTTGTAATAGTTTCGTTAAACCGTGTCCATAGAATAAATTAT 241686 Query 26466 CACCTAGCACAAGTGCTACAGAATCTTCACCAATAAAGTTCTCACCAATAATAAACGCTT 26525 |||| || ||||| ||||||||||| || |||||||| | || || |||||||| || | Sbjct 241685 CACCAAGAACAAGAGCTACAGAATCATCTCCAATAAACTCTTCTCCGATAATAAATGCCT 241626 Query 26526 CTGCTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGGAAATACCAAAAGAAGAAC 26585 |||||||| | || | || | ||||| | || || || || |||| Sbjct 241625 GAGCTAAACCGTCCGGTGAAGGTTGCACAGCATATTCAAGTTTTATCCCGAACTGTGAAC 241566 Query 26586 CATCACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTT 26645 |||| |||| | | | |||| | | ||| | |||||| | || || | |||| Sbjct 241565 CATCTCCTAATAACTCTTTAAAACGAGGTGTATCCTGTGGTGTAGAGATAATCAAAATTT 241506 Query 26646 CCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAA 26705 | | ||| || | |||||||| || || || ||||| || ||||| |||||||| || | Sbjct 241505 CGCGAATACCCGCAAGCATTAACACTGATAGCGGATAGTAGATCATTGGTTTATCATATA 241446 Query 26706 TTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCAC 26765 ||||||| ||| ||| ||| ||| || | ||||| | | ||||||||||| | Sbjct 241445 CAGGTAATAATTGCTTAGATACCGCTTGGGTTAAAGGGTATAAGCGAGTTCCACTACCTC 241386 Query 26766 CTGCTAAGATAATACCTTTCATA 26788 | || | ||||| ||||||||| Sbjct 241385 CAGCAAGAATAATCCCTTTCATA 241363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475398041018400