Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_024139.1 Length=108483 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 5e-11 >seq12 Length=209919 Score = 82.4 bits (90), Expect = 5e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 27359 TGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAACAGCGTA 27418 |||||| |||| || || | |||||||||||||| | | | |||| ||||| || Sbjct 27213 TGTACGGTTAATTACATCAATTTGTTGTTCACGAGTTAATTTAATAAAGTTTACAGCATA 27272 Query 27419 GCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATCCA--AA 27476 ||||| ||||| || || || || ||||| || |||||||||| | ||||||| || Sbjct 27273 ACCAGATACACGAATTGTTAATTGTGGATACTTCTCAGGATGTTCCATTGCATCCATTAA 27332 Query 27477 AGCTGATCACGGCTTAACACATTGACATTTAGGTGCTGACC 27517 | | |||||| | || || || | ||||| ||| || || Sbjct 27333 TGTT--TCACGGTTAAATACGTTAATATTTAAGTGGTGCCC 27371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346997771374380