Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_024364.1 Length=131952 Score E Sequences producing significant alignments: (Bits) Value seq2489 93.3 4e-14 seq69 93.3 4e-14 seq16 91.5 1e-13 >seq2489 Length=589 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 99379 TATTGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTTCGA 99438 || ||| || ||||||||||||||||||||||| ||||| ||||| || || |||||||| Sbjct 433 TAATGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCGCTGGTTCGA 492 Query 99439 ATCCAACTAGACCAGC 99454 ||||| |||| ||||| Sbjct 493 ATCCAGCTAGCCCAGC 508 >seq69 Length=88854 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 99376 TACTATTGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTT 99435 || || ||| || ||||||||||||||||||||||| ||||| ||||| || || ||||| Sbjct 88107 TATTAATGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCGCTGGTT 88048 Query 99436 CGAATCCAACTAGACCAGC 99454 |||||||| |||| ||||| Sbjct 88047 CGAATCCAGCTAGCCCAGC 88029 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 99382 TGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTTCGAATC 99441 ||| || ||||||||||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct 687 TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCGCTGGTTCGAATC 628 Query 99442 CAACTAGACCAGC 99454 || |||| ||||| Sbjct 627 CAGCTAGCCCAGC 615 >seq16 Length=199848 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 99382 TGGTCTGTAGCCAAGCGGTAAGGCAACGGATTTTGATTCCGTGATACGTTGGTTCGAATC 99441 ||| || ||||||||||||||||||||||| ||||| ||||| || || ||||||||||| Sbjct 1307 TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCGCTGGTTCGAATC 1366 Query 99442 CAACTAGACCAGC 99454 || |||| ||||| Sbjct 1367 CAGCTAGCCCAGC 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422093587614885