Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_024384.1 Length=41156 Score E Sequences producing significant alignments: (Bits) Value seq9 251 2e-62 >seq9 Length=252781 Score = 251 bits (278), Expect = 2e-62 Identities = 248/318 (78%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 5017 CGAATGATGAACCGTGTAGTGCTTGTAGGACGATTAACGAAAGACCCTGAATTACGTTAC 5076 ||| ||||||| ||||| | || || || || ||||| || |||||||| ||||||||| Sbjct 22203 CGATTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTAC 22262 Query 5077 ACTCCAGCTGGAGTAGCTGTTGCGACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAAT 5136 || || ||| || || || || ||||||||| |||| || |||||| ||||| ||| Sbjct 22263 ACGCCCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAAT 22322 Query 5137 GCACAAGGAGAACAAGAAGCCGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAA 5196 ||||| || | ||||| || || ||||||||||| | |||||||||| ||| ||| Sbjct 22323 CAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAA 22382 Query 5197 AACGCAGCTAATTTCTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACT 5256 |||| ||| |||| ||||||||||| ||| | |||||||| ||||||||| |||||||| Sbjct 22383 AACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACT 22442 Query 5257 CGTAATTATGA-GGACAGCGACGGTAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAAC 5315 |||||||| || ||||| || |||||||| || | ||| || || || |||| |||| Sbjct 22443 CGTAATTACGAGGGACA-AGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAG 22501 Query 5316 AGTTCAATTCTTAGAGCC 5333 || ||||| |||||||| Sbjct 22502 CGTGCAATTTTTAGAGCC 22519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131569092274620