Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_025423.1 Length=138658 Score E Sequences producing significant alignments: (Bits) Value seq12 167 2e-36 >seq12 Length=209919 Score = 167 bits (184), Expect = 2e-36 Identities = 413/609 (68%), Gaps = 26/609 (4%) Strand=Plus/Minus Query 61792 ATACTTGATACATATGCCCAGTTCTTTGACTGGAGCATGTGGGGAGAGGTACTTACTAG- 61850 || |||||||| ||||| ||||| || |||| | ||||||| | || || | | Sbjct 75930 ATCCTTGATACGTATGCTCAGTTTTTCGACTTGGACATGTGGATTAAAGTG-TTGCAGGA 75872 Query 61851 TAAATCAGCTTGGGGCTTAATAC-TAAGCTTAGTAGTTCTTGAGGGCTTGTTATCAGCAG 61909 | | | ||||||| ||||| || ||| || || ||||| || || ||||| || | Sbjct 75871 TCCAGTATCTTGGGGATTAATTGGTACACTT-GTTGTACTTGAAGGATTATTATCTGCTG 75813 Query 61910 ATAACGCCCTCGTACTTGCCATTATGGTACGACACTTACCAGAGAAACAACGCAAGAAAG 61969 ||||||| || || | || | |||||| ||| | || || || |||| || |||| Sbjct 75812 ATAACGCACTTGTGTTAGCGGTAATGGTAAAACATCTTCCGGAAGAAAAACGTAAAAAAG 75753 Query 61970 CTTTATTCTACGGACTAATTGGTGCCTACTTCTTCCGCTTCCTATTC--ATCGGAGTGGG 62027 | |||||||| ||||| ||||| || || | |||||||| |||| || ||| | || Sbjct 75752 CATTATTCTATGGACTTATTGGAGCTTATGTGTTCCGCTT--TATTGCGATTGGAATCGG 75695 Query 62028 AACTTTACTAATCAAGTTGTGGTACGTTAAATTGATTGGTGCATTATAC-TTACTGTGGA 62086 || || |||| || || |||| || ||| | |||||||| | ||| || || ||| Sbjct 75694 AATGTTCTTAATTAAATTATGGTGGGTAAAACTTCTTGGTGCACTTTACCTTGCT-TGGT 75636 Query 62087 TTGTAATTGACCACT--ATCG-TAAG---AAAGGTGCA---GAGGAAGAGGG----CAAG 62133 | | | | ||| || | |||| ||||||||| || ||||| | || | Sbjct 75635 TATCAGTAAAATACTTTATTGATAAGCGTAAAGGTGCAAGTGAAGAAGACGAAGCTCACG 75576 Query 62134 GAATTCAATACAGGTGGAATACT-TGTAAAATGGTTCGGTGTATTCTGGGCTACAGTTAT 62192 | || ||| | | | || || | || |||| || ||||| ||||||| || ||| Sbjct 75575 GTATG-AATCAAAATAGTATTCTCTTTAGAATGTTT-GGTGTCTTCTGGGGAACGGTTGC 75518 Query 62193 CTCTGTTGAGATTATGGACGTAGCATTCTCTGTAGACAGTATCCTAGCAGCACTTGGTGT 62252 ||||| | ||||| | |||||||||||||| || | || || ||| ||||||| Sbjct 75517 GATGGTTGAATTAATGGATATCGCATTCTCTGTAGATAGCGTACTTGCTGCATTTGGTGT 75458 Query 62253 ATCTGAACAGGTTTGGGTACTACTAATGGGTGGAATGATAGGAATTCTAATAATGCGTGG 62312 |||| | | |||||| | ||||| | || |||||| |||| ||| |||| |||||||| Sbjct 75457 ATCTAATGAAGTTTGGATTTTACTATTAGGCGGAATGCTAGGTATTTTAATGATGCGTGG 75398 Query 62313 TGTAGCTCAATTATTCCTATGGTTAATGGAGAAAGTGCCAGAACTAGAGAACACAGCATA 62372 | | ||| ||||| || || | ||| | ||||| || || | |||||||| Sbjct 75397 TATTGCTGGTGTATTCTTAAAATTGTTAGAGCGTATTCCAGAGCTTGAAACGACAGCATA 75338 Query 62373 CTTCTTGAT 62381 | | || || Sbjct 75337 CATTTTAAT 75329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443547408999600