Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_026016.1 Length=43748 Score E Sequences producing significant alignments: (Bits) Value seq9 131 5e-26 >seq9 Length=252781 Score = 131 bits (144), Expect = 5e-26 Identities = 209/298 (70%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 30963 CGGTTCTAAAAATTGAATACTATCAGCAATAACTTCCGTAACGTATACACGTTGACCTTC 31022 ||| ||||||||||| | || || |||| |||||| || ||||||||||||| ||| || Sbjct 22520 CGGCTCTAAAAATTGCACGCTTTCCGCAAGAACTTCTGTTACGTATACACGTTTACCATC 22461 Query 31023 CTTATTTTCATAGTTCCGCGTTTGTAACCTACCATCTACGCCCGCCAACGATCCTTT--- 31079 | || || || || ||||| | | ||||||||||| || || ||||| Sbjct 22460 TTGTCCCTCGTAATTACGAGTTTGAAGACGTCCATCTACGCCTGCTAAGCTACCTTTTTT 22401 Query 31080 -AGATAGGTATTTATTAACGTTCTCTGCTTGTTTTTTAAATACGATGATATTAATAAAGT 31138 | ||| |||| || |||| ||||||||||| ||| | ||||||||||| Sbjct 22400 CAAATA---ATTTGCTA-CGTTTTCTGCTTGTTTACGCCATATTACACAATTAATAAAGT 22345 Query 31139 CTGCCTCGCGCTCTCCTTGTGCATTCGTAAATGTGCGGTTAACTGCTAATGTGAATGATG 31198 | || || ||||| ||||| ||| | ||||| ||| || || ||||| || || | | Sbjct 22344 CAGCTTCACGCTCACCTTGCTGATTGGCAAATGCGCGATTCACAGCTAACGTAAAAGTAG 22285 Query 31199 CTACATTTACACCACTTTGAGTGGTTCTTAATTCTGGGTCTCTAGTTAAACGACCAAC 31256 |||| |||||| | | ||| | ||| || ||||| |||||||||||||||| Sbjct 22284 CTACTGCGACACCATTGGGCGTGTAACGTAAGTCAGGGTCCTTAGTTAAACGACCAAC 22227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139862955963900