Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq3539 82.4 8e-11 >seq3539 Length=324 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 71210 CGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCTACTAAGCTAAATC 71269 ||| |||||||||| ||||| || | |||| || ||||| || || |||||| | Sbjct 93 CGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTAAGGC 152 Query 71270 AGCAAATTGGTCTCCACA-GA-ATGACTCGAACATTCGACCTCCTGGTCCCAAACCAGGC 71327 |||| || || | || | || | |||| | ||||| ||||||||||||||||| Sbjct 153 CCCAAACAAGTATCGGGAAGACAGGATTTGAACCTGCGACCCCCTGGTCCCAAACCAGGT 212 Query 71328 GCTCTACCAAGCTGAGC 71344 ||||||||||||||||| Sbjct 213 GCTCTACCAAGCTGAGC 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544926108442200