Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 seq1 89.7 5e-13 >seq2 Length=633208 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/153 (75%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 107124 AGCGGTGTTGTTCCTGTTATGAAAATGCTAGAAGA--CGGTTTCCGGTACGCAAATCAGT 107181 || || || || |||||||||||| |||| ||||| || |||| || || |||||| Sbjct 184180 AGTGGCGTAGTACCTGTTATGAAATTGCTTGAAGATTCGTTTTC--ATATGCGAATCAGC 184237 Query 107182 TAGGGCAAAGACAAGGTGCAGGCGCAGTCTATCTAAATGTTTTCCATGCGGATATTATGG 107241 | || ||| || ||||||| || ||||| ||| |||| |||||||| ||||||||| | Sbjct 184238 TTGGCCAACGAAAAGGTGCCGGTGCAGTATATTTAAACATTTTCCATTGGGATATTATTG 184297 Query 107242 ACTT--TTTATCAACTAGAAAAGAAAATGCAGA 107272 | || || || || | |||| |||||| || Sbjct 184298 AATTCCTTGAT--ACAAAAAAAATAAATGCCGA 184328 >seq1 Length=1156483 Score = 89.7 bits (98), Expect = 5e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 102468 ATTAAGGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGT 102527 || |||||| |||||||||| |||| |||||| ||||||||||||| |||||| |||| Sbjct 1156312 ATAAAGGACCTTTAGCTCAGCTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGT 1156253 Query 102528 TCGAGACCTGCAATGTCCA 102546 ||||| ||| ||| ||||| Sbjct 1156252 TCGAGTCCTACAAGGTCCA 1156234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465497914891600