Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=633208 Score = 91.5 bits (100), Expect = 1e-13 Identities = 267/409 (65%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 68954 CAATTGTCTAAAATGGGTGGTGGAGTTGGAATCAACTTAACTGATATCCGTCCGTCAGGA 69013 ||||| || ||||| || || ||||| | | |||||| || | | || | || Sbjct 184090 CAATTATCGAAAATCGGCGGGGGAGTAGCTTTAAACTTATCTAAGCTACGCGCACGCGGT 184149 Query 69014 GACCCTATCAAGGGTATTGAGAATATGGCTGATGGAGTTGTTCCAATCATGAAACTCTAT 69073 || | || || ||||| || || || ||| || || || | |||||| | | Sbjct 184150 GAGCAAATTAAAGGTATCGACAACGCTGCAAGTGGCGTAGTACCTGTTATGAAATTGCTT 184209 Query 69074 GAAGATTCATTTTCATATGCCAATCAGTTGGGGACAAGAAATGGGGCAGGAGTAACTTAT 69133 |||||||| ||||||||||| |||||| | || | |||| || || || | | ||| Sbjct 184210 GAAGATTCGTTTTCATATGCGAATCAGCTTGGCCAACGAAAAGGTGCCGGTGCAGTATAT 184269 Query 69134 CTCAATGTATTCCATAAAGATATTGTTAAATTCCTCTCTACaaaaaaaGAAAATGCTGAC 69193 | || | |||||| |||||| || ||||||| |||||||||| |||||| || Sbjct 184270 TTAAACATTTTCCATTGGGATATTATTGAATTCCTTGATACAAAAAAAATAAATGCCGAT 184329 Query 69194 GAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGTGTTGTAGTTCCTGATAAATTCTATGAA 69253 || || ||| || | |||| || |||| || | ||||| ||| |||| ||| Sbjct 184330 GAGAAGAGCCGTATTCAGTCTCTATCAATCGGAATTATCGTTCCAAGTAAGTTCTTTGAG 184389 Query 69254 CTCATTGCTAAAGGTGAATCAATGTATTTGTTTAGC-CCTTATGATATCTACAATGAGTA 69312 || || ||| ||| | | || | ||| || |||||| | || || || || Sbjct 184390 CTTGCTGAGAAAAACGAACCTTTCCATGT-TTTCGCGCCTTATACGGTTTATAAAGAATA 184448 Query 69313 TGGAAAACTAATGTCTGAAATCAACATCACAGAAATGTATGATGAATTA 69361 ||| || | | ||| || |||| |||||||| ||||||||| Sbjct 184449 TGGCAAGCATTTAGATGATATTGACATTGATGAAATGTACGATGAATTA 184497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415873200433005