Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 7e-12 >seq4 Length=425142 Score = 86.0 bits (94), Expect = 7e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 141402 TGCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTGCAAATC 141461 ||||||||| ||||| | || | ||| | |||| ||||||||||||| |||| || Sbjct 259932 TGCAATGTTAAATGGAATTCCAAGGAATATGTCACCACTTCTTTGATATAACTGACAAGA 259873 Query 141462 CAAATAGCCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATATA 141521 | | |||| |||| |||||| | | | |||||||||||||||| |||||| Sbjct 259872 AAGCTTTCCATCTGCTACATAAAACTGGAATAGCGTATGACAAGGCGGTAAGGCCATACT 259813 Query 141522 TTTAAGTTCAGCTGGATTCCATGCAGAAACAATTTGACGCCTATCATTC-GGCAGTTTTT 141580 | | || |||||||||| |||||||| ||| ||| | | | || || ||||| Sbjct 259812 TGGTACATCTTCTGGATTCCAAGCAGAAACGATTAAACGAC-GTGAGTCTGGTGTTTTTT 259754 Query 141581 TAATACGATCAATAACTTCTATAATTTGGTC 141611 |||| ||||| || ||| | | ||| || Sbjct 259753 TAATCATTTCAATTACATCTTTTAATTGATC 259723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534162041121400