Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=425142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 181/265 (68%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA-ATGGTGAACTGTC 41107 ||||| || || ||||||||| | ||| |||||||| || ||| |||| | || || Sbjct 259816 ATGGCCTTACCGCCTTGTCATACGCTATTCCAGTTTTATGTA-GCAGATGGAAAGCTTTC 259874 Query 41108 ATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAG 41167 ||||| || ||||||||| |||||||| || || | || |||||||| || || Sbjct 259875 TTGTCAGTTATATCAAAGAAGTGGTGACATATTCCTTGGAATTCCATTTAACATTGCAAG 259934 Query 41168 TTATGCTCTGCTCACGTATATGATTGCACACGT-TACCAATTTAAAACCTGGTGAATTTG 41226 ||| | || || || || | |||||||| | | | | || || || ||||||| Sbjct 259935 TTACTCACTACTAACACATTTAATTGCACATGAATGCGGACTTGAAGTG-GGAGAATTTG 259993 Query 41227 TTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAAC 41286 |||| || | || |||| ||| ||||| | ||||| | || | || | | ||| Sbjct 259994 TTCATACAATTGGTGATGCACACATTTATACAAATCATTTTGAACAAGTAGAAAAGCAAT 260053 Query 41287 TGACACGAAAACCTAGACCATTTCC 41311 || |||| |||| | ||||| || Sbjct 260054 TGGCACGTGAACCACGTCCATTCCC 260078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397429624447225