Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq14 143 2e-29 >seq14 Length=201404 Score = 143 bits (158), Expect = 2e-29 Identities = 196/271 (72%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCCGA 30245 || |||||| ||||| ||||| || || || | |||| | |||||||| |||| Sbjct 179993 CAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCC-TATACTCTGCGCCGA 180051 Query 30246 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 30305 ||||||||||||||||||| || ||||||||||| || ||||||||||| || | || | Sbjct 180052 AATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAACC 180111 Query 30306 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAG 30365 | ||| |||| ||| | ||| || || || | ||||| || || |||||||| || | Sbjct 180112 CAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGG 180171 Query 30366 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30425 | | ||| || | || || |||| |||||||| ||||| ||||| | || | Sbjct 180172 ACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTC 180231 Query 30426 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||| ||||||| || | ||||| Sbjct 180232 GCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 180262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406283436860940