Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028671.1 Length=41307 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-17 >seq1 Length=1156483 Score = 102 bits (112), Expect = 2e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 37521 GGACCATTAGCTCAGCTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37580 ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct 561963 GGACCCTTAGCTCAGCTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 561904 Query 37581 TCCTGTATGGTCCATA 37596 |||| | |||||||| Sbjct 561903 TCCTACAGGGTCCATA 561888 Score = 100 bits (110), Expect = 8e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 37520 AGGACCATTAGCTCAGCTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGA 37579 |||||| ||||||||||||||||||||| ||||||||||||||| ||||| |||||||| Sbjct 1156308 AGGACCTTTAGCTCAGCTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGA 1156249 Query 37580 GTCCTGTATGGTCCA 37594 ||||| | |||||| Sbjct 1156248 GTCCTACAAGGTCCA 1156234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132052261031210