Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq3 230 7e-56 >seq3 Length=500241 Score = 230 bits (254), Expect = 7e-56 Identities = 328/457 (72%), Gaps = 6/457 (1%) Strand=Plus/Plus Query 15378 AAGGAGAAGCCCAATGATGGAAATCAGACAGATGCTAGTAGGACCTAGCAAATATGGCAT 15437 ||||||| || | |||||||| ||| | | |||| | || || |||||||| || Sbjct 210 AAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATGGTAT 269 Query 15438 CAAATGTCCGAATAAAATGGCACCGAAATATATTACGTTTCACAATACCTATAATGATGC 15497 || ||||| |||| |||| |||| ||| || || | || ||||| || |||||||| Sbjct 270 AAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATGATGC 329 Query 15498 CCCAGCAGAAAATGAGAT-TCGCTATATGATCGGGAACAATAACGAGGTTTCGTTCCACG 15556 |||||||||||||||| ||| |||||||| ||||| ||||| || ||||| || | Sbjct 330 ATCAGCAGAAAATGAGATATCG-TATATGATTGGGAATAATAATTCAGTGTCGTTTCATG 388 Query 15557 TTGCTGTGGACGATATGGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATT 15616 |||| || || || | ||||| || || || |||| |||||||| ||||| |||||| Sbjct 389 TTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGCATG 448 Query 15617 GCGGAGACGGGAACGGAACAGGAAACCGTCAGTCCATCGGCGTAGAGATTTGTTA--CTC 15674 || || || ||||||| || || ||| | || ||||| || || ||||| || ||| Sbjct 449 CAGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTATTCTC 508 Query 15675 TAAGTCCGGCGGCAACCGCTATTACAAAGCAGAAGACCATGCGGCTATTATCATTGCCCA 15734 |||| ||| || | | |||||||| || || || |||| || ||| | ||||| || Sbjct 509 TAAG--CGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCTCA 566 Query 15735 GCTTATGAAACAGTTTTGTATTCCTATTGGAAATGTGGTTCCGCACCAGCACTGGAGTGG 15794 | | |||||||| || ||| || ||| | ||||| | | || | |||||||| Sbjct 567 GTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGTGG 626 Query 15795 TAAATACTGCCCGCACAGAATGTTAGATGAGGGAAGA 15831 || | ||||| || ||||| | ||||| |||||| Sbjct 627 AAAGCATTGCCCACATCGAATGCTCGATGAAGGAAGA 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141466052301990