Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq2 167 2e-36 >seq2 Length=633208 Score = 167 bits (184), Expect = 2e-36 Identities = 432/653 (66%), Gaps = 28/653 (4%) Strand=Plus/Minus Query 96417 AAGAAATCAAATGTCTTAGTCTCTGTAGACAATCCATTTAATACAATGGGGTTAATTTTC 96476 ||||||||| | || || |||||| || |||||||| || || |||||||||| Sbjct 186599 AAGAAATCATGGTTTTTCGTATCTGTACGTAAACCATTTAAAACGATTGGGTTAATTTCT 186540 Query 96477 TCTTCCTTGTAATAAGTCTCTCTACCTAAATTCATAAGAGCCTTATTGGCATTGTATTTA 96536 ||||| | | | | ||| ||||| |||||||| | ||||| |||||||| | Sbjct 186539 TCTTCTTCAAACTTCGGCTCAAGTCCTAAGTTCATAAGCCCTTTATTCGCATTGTAACGA 186480 Query 96537 AGGAA-CGATTTAACTTCGTTATCAAGATTAATTCCAGAGTAAATTTCCTGTGTATAACC 96595 | ||| ||||||| | || | ||||| || || ||||||||| | |||||| | Sbjct 186479 ACGAAACGATTTA-CATCTTCTACAAGACCGATAGAAGTGTAAATTTCTTCTGTATAGGC 186421 Query 96596 AATCTCGTTATCCATTAACTCATCGAGCAAACGATAAA-CAAGATTATCT------ACCT 96648 || || | || || | | || | || |||| | | | ||| || | Sbjct 186420 CATTTCAATTTC-ATATAGT--TCCATTAA----TAAATCTTGTGTTTCTTTTTGCACTT 186368 Query 96649 CTTCTTTCTCTTCCTCTGATAGCTCAGAATAAATTTCTTGTCCAAGCAAACCACCAAATA 96708 ||| || |||||| | || || || | | |||| |||| | | | ||| | |||| Sbjct 186367 CTTGTTGCTCTTCTGCAGAAAGTTCTGCGAAGATTTGTTGTGCTAAAATACCGACGAATA 186308 Query 96709 GTCCATGCACACTTTCATCACGAATGATTAAGTTAATAATTTCACCACTTGCAACCATCT 96768 || || | ||||||||||| || ||||| ||||| ||||||||||| | | Sbjct 186307 CGCCGTGAATTGACTCATCACGAATTATCAAGTTGATAATCTCACCACTTGCTGTTAGTT 186248 Query 96769 TCCCTTGACCAGCCAAATACAGAGGGTAAAAGAAACCACTATAAAATAGGAACGACTCTA 96828 | ||||||||||| || || || || || ||||| || ||||| |||| | | |||| Sbjct 186247 TTCCTTGACCAGCTAAGTAAAGTGGATAGAAGAATCCGCTATAGAATAAGTAACTTTCTA 186188 Query 96829 AGAACACAGAGGCTACAATTGCCATATATAAGTCTTTCTTTGT---TTCAATGTT----- 96880 |||||||| ||||| |||||||| ||||| ||||| ||||| |||| || Sbjct 186187 AGAACACACTTGCTACCATTGCCATGTATAACTCTTTTTTTGTTACTTCAGGCTTTAATA 186128 Query 96881 ----GCGGTAATATTTGTCAATGATAGACACTTTCTTTTGTAGATATTTATTCTCAGCGA 96936 || || || | ||| ||| |||| || | || | || | | | Sbjct 186127 AACGACGATAGTAACTAGTAATAATACCAGCTTTTTTCTCAAGTAACGGATGATTGTCTA 186068 Query 96937 CCCAATCAAATACATCGTCGATTTCTTCCTTTGTGGCTAATGTTGTAAAAATTGTACTAT 96996 |||| ||||| | ||| || || ||||| | ||| ||||||||||| ||||| ||||| Sbjct 186067 CCCAGTCAAAAATATCATCAATCTCTTCTTCTGTAGCTAATGTTGTGAAAATGTGACTAT 186008 Query 96997 AAGATTTTGCATGGATGCCTTCCATCATTCCCATAAAAGACAAGACAGATTTC 97049 || ||| ||||| | ||||||| |||||| |||| || ||| |||| Sbjct 186007 AACTTTTCGCATGTACTTCTTCCATAGCTCCCATGAAAGCTAATACACTTTTC 185955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429510695375995