Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028758.1 Length=35644 Score E Sequences producing significant alignments: (Bits) Value seq3 268 2e-67 >seq3 Length=500241 Score = 268 bits (296), Expect = 2e-67 Identities = 334/456 (73%), Gaps = 4/456 (1%) Strand=Plus/Plus Query 14209 AAGGAGAAATCCAATGATGGAAATCAGAGAAATGCTAGTAGACCCAAGTAAATATGGCAT 14268 ||||||| | || | |||||||| ||| ||| |||| || |||||||||||||| || Sbjct 210 AAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATGGTAT 269 Query 14269 CAAATGTCCGAACAAGATGACACCAAAATATATTACGTTTCACAATACGGCTAATGATGC 14328 || ||||| || | ||||||||| ||| || || | || |||||| |||||||| Sbjct 270 AAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATGATGC 329 Query 14329 GCCTGCAGAAAATGAGATCCGTTATATGATCGGTAACAATAACGAGGTTTCGTTCCACGT 14388 | |||||||||||||| |||||||| || || ||||| || ||||| || || Sbjct 330 ATCAGCAGAAAATGAGATATCGTATATGATTGGGAATAATAATTCAGTGTCGTTTCATGT 389 Query 14389 TGCTGTGGACGATAAGGAAGCAGTTCAGGGAATTCCTTTTGATCGAAACGCCTGGCATTG 14448 ||| || || || || |||||||| || || |||| |||||||| || || |||||| Sbjct 390 TGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGCATGC 449 Query 14449 CGGAGATGGAAACGGAACAGGAAACCGTCAATCCATCGGCGTAGAGATTTGTTAT--TCC 14506 || ||||| ||||||| || || ||| |||| ||||| || || ||||| ||| || Sbjct 450 AGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTATTCTCT 509 Query 14507 AAGTCCGGCGGTAACCGATATTATAAGGCCGAGGACAATGCGGCTATTGTCATTGCCCAA 14566 ||| ||| || | ||||||| ||||| ||||| ||||| || ||||| ||||| || Sbjct 510 AAG--CGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCTCAG 567 Query 14567 CTAATGAAACAGTTTTGTATTCCTATTGAGAATGTGGTTCCACACCAGCACTGGAGTGGT 14626 |||||||||| || ||| || ||| ||||| | |||| | |||||||| Sbjct 568 TTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGTGGA 627 Query 14627 AAATACTGTCCGCACAGAATGCTGGATGAAGGAAGA 14662 || | || || || ||||||| |||||||||||| Sbjct 628 AAGCATTGCCCACATCGAATGCTCGATGAAGGAAGA 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113931832762540