Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028767.1 Length=45653 Score E Sequences producing significant alignments: (Bits) Value seq3 239 1e-58 seq168 84.2 6e-12 >seq3 Length=500241 Score = 239 bits (264), Expect = 1e-58 Identities = 333/462 (72%), Gaps = 6/462 (1%) Strand=Plus/Plus Query 15367 AAACGGAGGTGCTGAATGATGGAAATTAGACAGATGTTAGTTGACCCAAGCAAATATGGT 15426 ||| |||| | | | | |||||||||||| | | ||||| || ||||| ||||||||| Sbjct 208 AAAAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATGGT 267 Query 15427 GTTAAATGCCCAAACAAGATGACACCAAAATATATTACGTTTCACAATACCTACAATGAT 15486 | || || || || | ||||||||| ||| || || | || ||||| ||||||||| Sbjct 268 ATAAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATGAT 327 Query 15487 GCTCCAGCGGAGAATGAGAT-TCGCTATATGATTGGAAACAACAGAGAAGTTAGCTTCCA 15545 || |||| || |||||||| ||| ||||||||||| || || | ||| || || Sbjct 328 GCATCAGCAGAAAATGAGATATCG-TATATGATTGGGAATAATAATTCAGTGTCGTTTCA 386 Query 15546 CGTTGCTGTGGACGATAAAGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCATGGCA 15605 ||||| || || || |||||||| || || || |||| |||||||| ||||| ||||| Sbjct 387 TGTTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGCA 446 Query 15606 TTGCGGAGATGGGAACGGAACAGGAAACCGTCAGTCCATCGGCGTAGAGATTTGTTAT-- 15663 | || ||||| ||||||| || || ||| | || ||||| || || ||||| ||| Sbjct 447 TGCAGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTATTC 506 Query 15664 TCCAAGTCCGGCGGTAACCGATATTATAAGGCCGAGGACAATGCGGCTATTGTCATTGCC 15723 || ||| ||| || | ||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 507 TCTAAG--CGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCT 564 Query 15724 CAGCTTATGAAACAGTTTTGCATTCCTGTTGAGAATGTGGTTCCACATCAGCACTGGAGC 15783 ||| | |||||||| || || || || ||||| | ||||| | ||||| Sbjct 565 CAGTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGT 624 Query 15784 CGTAAATACTGCCCGCACAGAATGTTAGATGAGGGAAGAGTG 15825 | || | ||||| || ||||| | ||||| ||||||||| Sbjct 625 GGAAAGCATTGCCCACATCGAATGCTCGATGAAGGAAGAGTG 666 >seq168 Length=48346 Score = 84.2 bits (92), Expect = 6e-12 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 31908 ATGAAAGCAACCGGAATTGTAAAGAAACTTGACCATTTAGGACGGGTAGTTATCCCGAAA 31967 |||||| | || || ||||| ||| |||| | ||||| || ||||| || || | Sbjct 7027 ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATC 6968 Query 31968 GAACTTCGCGGCACTTTAGGCATTGGTGAAAAAGACGCTCTGGAAATCTATGTAGACGGT 32027 ||| | ||| | |||||||| |||| ||||| |||||||| ||||||||||| || | Sbjct 6967 GAATTACGCCGTACTTTAGGTATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGAC 6908 Query 32028 GAGCGCATTATGCTGAAGAAATATAACCC 32056 || || || | ||||||||||| || Sbjct 6907 GAAAAAATCATCTTAAAGAAATATAAACC 6879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145958561800350