Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028805.1 Length=126341 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=1156483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/144 (74%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 76735 TGACGTTCAATTTCGGCCTGTAATTTATCCTCAGGTGCTTCCCATCCTTCTGGCTTGATA 76794 |||||||||||||| || | | || || ||||||| ||| ||||||||||| | | Sbjct 1024074 TGACGTTCAATTTCAGCACGAAGTTGTGGTTCCGGTGCTTGCCAGCCTTCTGGCTTTAGA 1024015 Query 76795 ATCTTGTTGTTACGGTCAGCATCGTAA-CGTGGTTTACCATCAGGAAATAGCTTTGACAT 76853 ||||| || | ||| || || || || || |||||||| ||||| |||| ||| Sbjct 1024014 ATCTTACCGTCGCCTTCA----CGGAATCGAGGCTTCCCATCAGGGAATAGTTTTGCCAT 1023959 Query 76854 GTTGGCATTCTGTACAATTTCAAA 76877 |||||| || | ||||||||| || Sbjct 1023958 GTTGGCGTTGTTTACAATTTCGAA 1023935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404139579138790