Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 4e-14 >seq9 Length=252781 Score = 91.5 bits (100), Expect = 4e-14 Identities = 198/294 (67%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 28141 GGTTCAAGAAATTGAACGCTATCTGCAACTACTTCAGTCACAAATATTCGACGACCTTCT 28200 || || | |||||| ||||| || |||| ||||| || || ||| || ||| ||| Sbjct 22519 GGCTCTAAAAATTGCACGCTTTCCGCAAGAACTTCTGTTACGTATACACGTTTACCATCT 22460 Query 28201 TGATTTTCATAACTGCATGATTGAATTCGACCATCAACGCCTGCTAATTTTCCTTTCGAT 28260 || || ||| | | | ||||| || ||||| ||||||||||| | ||||| Sbjct 22459 TGTCCCTCGTAATTACGAGTTTGAAGACGTCCATCTACGCCTGCTAAGCTACCTTTTTTC 22400 Query 28261 AAATAGTTGTTAACATTGTGTGCTTGTTTTCTAAATACGATAATATTGATAAAATCTGCT 28320 ||||| || || || | ||||||||| | ||| | | ||| ||||| || ||| Sbjct 22399 AAATAATTTGCTACGTTTTCTGCTTGTTTACGCCATATTACACAATTAATAAAGTCAGCT 22340 Query 28321 TCACGTTCACCCTGTGCGTTTGTGAAAT-TACGATTAACTGCTAGTGTGAAAGTTGCAAC 28379 ||||| ||||| || | ||| |||| ||||| || |||| || ||||| || || Sbjct 22339 TCACGCTCACCTTG-CTGATTGGCAAATGCGCGATTCACAGCTAACGTAAAAGTAGCTAC 22281 Query 28380 ATCAATTCCACTTTGAGTTGTTCTAAATTCAGGATCTTTAGTTAAACGACCTAC 28433 | | ||| | | || | || ||||| || |||||||||||||| || Sbjct 22280 TGCGACACCATTGGGCGTGTAACGTAAGTCAGGGTCCTTAGTTAAACGACCAAC 22227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130013992832880