Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 5e-11 >seq12 Length=209919 Score = 82.4 bits (90), Expect = 5e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 106581 GGTCAACACCTAAATGTCAATGTGTTAAGTCGTGATCAGCTTT--TGGATGCACAGAAAC 106638 || || ||| ||||| | || || || | ||||| | | || |||||||| | ||| Sbjct 27371 GGGCACCACTTAAATATTAACGTATTTAACCGTGA--AACATTAATGGATGCAATGGAAC 27314 Query 106639 ATCCTGAAAAATACCCTCAATTAACTATCCGTGTTTCAGGATACGCTGTACGTTTTAATG 106698 ||||||| || || || |||||||| || ||||| || || || |||||| |||| | Sbjct 27313 ATCCTGAGAAGTATCCACAATTAACAATTCGTGTATCTGGTTATGCTGTAAACTTTATTA 27254 Query 106699 CACTGACGCGTGAACAACAGAACGACGTTATTAGTCGTACA 106739 | | || ||||||||||| | || || |||| |||||| Sbjct 27253 AATTAACTCGTGAACAACAAATTGATGTAATTAACCGTACA 27213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357454677398240