Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028851.1 Length=37995 Score E Sequences producing significant alignments: (Bits) Value seq3 239 1e-58 >seq3 Length=500241 Score = 239 bits (264), Expect = 1e-58 Identities = 330/457 (72%), Gaps = 6/457 (1%) Strand=Plus/Plus Query 14189 AAGGAGAAATCCAATGATGGAAATCAGAGAAATGCTAGTAGACCCAAGTAAATACGGCAT 14248 ||||||| | || | |||||||| ||| ||| |||| || ||||||||||| || || Sbjct 210 AAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATGGTAT 269 Query 14249 TAAATGCCCAAACAAGATGACACCAAAATATATTACGTTTCACAACACGTCCAATGATGC 14308 || || || || | ||||||||| ||| || || | || || |||| ||||||||| Sbjct 270 AAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATGATGC 329 Query 14309 CCCAGCAGAAAATGAGAT-TCGCTATATGATTGGAAACAACAATGAAGTCAGCTTCCACG 14367 |||||||||||||||| ||| ||||||||||| || || ||| ||| || || | Sbjct 330 ATCAGCAGAAAATGAGATATCG-TATATGATTGGGAATAATAATTCAGTGTCGTTTCATG 388 Query 14368 TTGCTGTGGACGATAAAGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATT 14427 |||| || || || |||||||| || || || |||| |||||||| ||||| |||||| Sbjct 389 TTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGCATG 448 Query 14428 GTGGAGACGGGAACGGGACAGGAAACCGTCAGTCCATCGGCGTAGAAATTTGTTA--CTC 14485 || || || ||||| | || || ||| | || ||||| || |||||||| || ||| Sbjct 449 CAGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTATTCTC 508 Query 14486 TAAGTCCGGCGGCAGCCGCTATTACAAAGCAGAAGACAATGCGGCTATTGTCATTGCCCA 14545 |||| ||| || | |||||||| || || || ||||| || ||||| ||||| || Sbjct 509 TAAG--CGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCTCA 566 Query 14546 GCTTATGAAACAGTTTTGTATTCCTATTGAGAATGTGGTTCCGCACCAGCACTGGAGTGG 14605 | | |||||||| || ||| || ||| ||||| | | || | |||||||| Sbjct 567 GTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGTGG 626 Query 14606 TAAATACTGTCCGCACAGAATGTTAGATGAGGGAAGA 14642 || | || || || ||||| | ||||| |||||| Sbjct 627 AAAGCATTGCCCACATCGAATGCTCGATGAAGGAAGA 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121454546317130