Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028854.1 Length=43724 Score E Sequences producing significant alignments: (Bits) Value seq3 259 1e-64 >seq3 Length=500241 Score = 259 bits (286), Expect = 1e-64 Identities = 336/460 (73%), Gaps = 6/460 (1%) Strand=Plus/Plus Query 14189 AAGGAGAAATCCAATGATGGAAATCAGAGAAATGCTAGTAGACCCAAGTAAATATGGAAT 14248 ||||||| | || | |||||||| ||| ||| |||| || |||||||||||||| || Sbjct 210 AAGGAGATAATCAGTAATGGAAATTAGAAAAAAATTAGTGGATCCAAGTAAATATGGTAT 269 Query 14249 TAAATGTCCGAATAAAATGGCACCGAAATATATTACGTTCCACAATACGTATAACGATGC 14308 || ||||| |||| |||| |||| ||| || || | || |||||||| || ||||| Sbjct 270 AAAGTGTCCCAATACAATGACACCAGAATTCATCACAGTACATAATACGTACAATGATGC 329 Query 14309 TCCCGCAGAAAATGAGGT-TCGTTACATGATCGGGAACAATAACGAGGTTTCGTTCCACG 14367 | |||||||||||| | ||| || ||||| ||||| ||||| || ||||| || | Sbjct 330 ATCAGCAGAAAATGAGATATCG-TATATGATTGGGAATAATAATTCAGTGTCGTTTCATG 388 Query 14368 TTGCTGTGGATGATAAGGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATT 14427 |||| || ||||| || ||||| || || || |||| |||||||| ||||| |||||| Sbjct 389 TTGCAGTAGATGACAAAGAAGCAGTACAAGGTATTCTGTTTGATCGTAATGCTTGGCATG 448 Query 14428 GTGGAGACGGGAACGGGACAGGAAACCGTCAATCCATCGGCGTAGAGATTTGTTAT--TC 14485 || || || ||||| | || || ||| |||| ||||| || || ||||| ||| || Sbjct 449 CAGGTGATGGTAACGGAAATGGTAATCGTAAATCTATCGGAGTGGAAATTTGCTATTCTC 508 Query 14486 CAAGTCCGGCGGTAACCGATATTATAAGGCCGAGGACAATGCGGCTATTATCATTGCCCA 14545 ||| ||| || | ||||||| ||||| ||||| ||||| || ||| | ||||| || Sbjct 509 TAAG--CGGTGGGGATAGATATTACAAGGCGGAGGATAATGCAGCAATTGTTATTGCTCA 566 Query 14546 GCTTATGAAACAGTTTTGTATTCCTATTGAGAATGTGGTTCCACACCAGCACTGGAGTGG 14605 | | |||||||| || ||| || ||| ||||| | |||| | |||||||| Sbjct 567 GTTAATGAAACAATTCAATATACCGATTAGTAATGTACGTACACATAAATCGTGGAGTGG 626 Query 14606 TAAATACTGTCCGCACAGAATGTTAGATGAGGGAAGAGTG 14645 || | || || || ||||| | ||||| ||||||||| Sbjct 627 AAAGCATTGCCCACATCGAATGCTCGATGAAGGAAGAGTG 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139786160929740