Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028871.1 Length=38392 Score E Sequences producing significant alignments: (Bits) Value seq9 251 2e-62 seq133 100 7e-17 >seq9 Length=252781 Score = 251 bits (278), Expect = 2e-62 Identities = 248/318 (78%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 35494 CGAATGATGAACCGTGTAGTGCTTGTAGGACGATTAACGAAAGACCCTGAATTACGTTAC 35553 ||| ||||||| ||||| | || || || || ||||| || |||||||| ||||||||| Sbjct 22203 CGATTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTAC 22262 Query 35554 ACTCCAGCTGGAGTAGCTGTTGCGACTTTTACGCTAGCAGTAAATCGCCCATTTAAAAAT 35613 || || ||| || || || || ||||||||| |||| || |||||| ||||| ||| Sbjct 22263 ACGCCCAATGGTGTCGCAGTAGCTACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAAT 22322 Query 35614 GCACAAGGAGAACAAGAAGCCGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAA 35673 ||||| || | ||||| || || ||||||||||| | |||||||||| ||| ||| Sbjct 22323 CAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCAGAA 22382 Query 35674 AACGCAGCTAATTTCTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACT 35733 |||| ||| |||| ||||||||||| ||| | |||||||| ||||||||| |||||||| Sbjct 22383 AACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACT 22442 Query 35734 CGTAATTATGA-GGACAGCGACGGTAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAAC 35792 |||||||| || ||||| || |||||||| || | ||| || || || |||| |||| Sbjct 22443 CGTAATTACGAGGGACA-AGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAG 22501 Query 35793 AGTTCAATTCTTAGAGCC 35810 || ||||| |||||||| Sbjct 22502 CGTGCAATTTTTAGAGCC 22519 >seq133 Length=58497 Score = 100 bits (110), Expect = 7e-17 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 20955 ATGAAAGAACGTAAAAAATACGGATTGAAGGGCGCACGTCGTGCACCTCAGTTCTCAAAA 21014 |||||||| |||||||||||||| | || |||||||||||||||||||||||||||||| Sbjct 5679 ATGAAAGAGCGTAAAAAATACGGTCTTAAAGGCGCACGTCGTGCACCTCAGTTCTCAAAA 5620 Query 21015 CGTTAATT 21022 |||||||| Sbjct 5619 CGTTAATT 5612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122724864173860