Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_028984.1 Length=30664 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 1e-13 >seq9 Length=252781 Score = 89.7 bits (98), Expect = 1e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27909 AATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTTGGCGTCAGCAAGCT 27968 ||||| | ||||| ||||||||||| || |||||| || || |||||| | ||||| Sbjct 22320 AATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCA 22379 Query 27969 GAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAG 28028 ||||| |||| || | |||||||| | | |||| | ||| || |||| Sbjct 22380 GAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAA 22439 Query 28029 ACCCGCAATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGAT 28088 || || ||||| || ||| | ||| | ||||| ||||| ||||||||| ||||||| Sbjct 22440 ACTCGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAA 22499 Query 28089 AATTTCCAAATTTTGGA 28105 | | ||| |||| || Sbjct 22500 AGCGTGCAATTTTTAGA 22516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97996863174340