Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_029030.1 Length=31075 Score E Sequences producing significant alignments: (Bits) Value seq9 80.6 5e-11 >seq9 Length=252781 Score = 80.6 bits (88), Expect = 5e-11 Identities = 136/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 28734 AATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTTGGCGTCAGCAAGCT 28793 ||||| | ||||| ||||||||||| || |||||| || || |||||| | ||||| Sbjct 22320 AATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGCGTAAACAAGCA 22379 Query 28794 GAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAG 28853 ||||| |||| || | |||||||| | | |||| | ||| || |||| Sbjct 22380 GAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAA 22439 Query 28854 ACCCGCAATTATGAAAACCAGCAAGGACAGCGTGTTTATGTTACAGAAGTTGTTGCGGAT 28913 || || ||||| || || | || | ||||| || || ||||||||| ||||||| Sbjct 22440 ACTCGTAATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAA 22499 Query 28914 AATTTCCAATTTTTGGA 28930 | | |||||||| || Sbjct 22500 AGCGTGCAATTTTTAGA 22516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99311978134330