Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq4164 86.0 2e-12 seq325 86.0 2e-12 seq69 86.0 2e-12 seq16 86.0 2e-12 seq1 86.0 2e-12 seq436 84.2 7e-12 >seq4164 Length=251 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || ||||||| |||||||||| ||||||||||| ||||||||||||| |||| Sbjct 243 CGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATC 184 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 183 CTGTCCCCGCAACCA 169 >seq325 Length=23210 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || ||||||| |||||||||| ||||||||||| ||||||||||||| |||| Sbjct 22850 CGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATC 22791 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 22790 CTGTCCCCGCAACCA 22776 >seq69 Length=88854 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || ||||||| |||||||||| ||||||||||| ||||||||||||| |||| Sbjct 928 CGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATC 869 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 868 CTGTCCCCGCAACCA 854 >seq16 Length=199848 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || ||||||| |||||||||| ||||||||||| ||||||||||||| |||| Sbjct 641 CGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATC 700 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 701 CTGTCCCCGCAACCA 715 >seq1 Length=1156483 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || ||||||| |||||||||| ||||||||||| ||||||||||||| |||| Sbjct 1156091 CGGGGTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATC 1156032 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 1156031 CTGTCCCCGCAACCA 1156017 >seq436 Length=15937 Score = 84.2 bits (92), Expect = 7e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 21154 GTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATCCTGT 21213 || ||||||| |||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct 166 GTGGAGCAGCACGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAATCCTGT 225 Query 21214 CTCCGCAACCA 21224 | ||||||||| Sbjct 226 CCCCGCAACCA 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162514291248010