Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_029058.1 Length=106071 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 3e-13 seq69 84.2 1e-11 >seq1 Length=1156483 Score = 89.7 bits (98), Expect = 3e-13 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 30475 GAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCAGGGGCGC 30534 ||||| ||||||| |||||||||||||| ||| || |||| ||||||||||||| || Sbjct 1155331 GAGAAGAAGGGATTCGAACCCTCGCACCGCGTTCGCGATCTACTCCCTTAGCAGGGGAGC 1155390 Query 30535 CCCTTCAACCAACTTGGGTAATTCTC 30560 ||||| | || ||||||||| ||||| Sbjct 1155391 CCCTTGAGCC-ACTTGGGTACTTCTC 1155415 >seq69 Length=88854 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 30475 GAGAATGAGGGATTTGAACCCTCGCACCGGTTTCCCGGCCTACACCCTTAGCAGGGGCGC 30534 ||||| ||||||| |||||||||||||| || || |||| ||||||||||||| || Sbjct 1125 GAGAAGAAGGGATTCGAACCCTCGCACCGCGTTAGCGATCTACTCCCTTAGCAGGGGAGC 1184 Query 30535 CCCTTCAACCAACTTGGGTAATTCTC 30560 ||||| | || ||||||||| ||||| Sbjct 1185 CCCTTGAGCC-ACTTGGGTACTTCTC 1209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339279883574640