Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_030920.1 Length=165868 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 7e-12 >seq1 Length=1156483 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 132728 GCAAGAGAACTAATAGTTGAAAAGAATATGAGATTAGTGTGGAACGTAGTACATCGGTTT 132787 || ||||| ||| ||| ||| |||||| | | || ||| || ||||| |||||| Sbjct 370712 GCGAGAGATACAATCGTTCAAAGTAATATGCGCCTCGTTTGGTCGGTTGTACAGCGGTTT 370653 Query 132788 ATCAATAGGGGTTATCTTCCCGAAGACCTATTCCAAATTGGTTGTATAGGTTTGCTGAAG 132847 | ||| | || || || || |||||||| |||||||| ||||| || | |||| Sbjct 370652 CTTAATCGAGGATACGAACCAGACGACCTATTTCAAATTGGATGTATTGGGCTCTTGAAA 370593 Query 132848 AGTATTGATAAATTCGACCTTGACTACGATGTTGCTTTTTCTACCTACGCTGTTCCTATG 132907 | |||||||| || | | ||| || ||||| || || || ||||| ||| Sbjct 370592 TCGGTAGATAAATTTGATTTATCTTTCGACGTGAAATTTTCAACATATGCAGTTCCAATG 370533 Query 132908 ATTATTGGAGAGATTCAAAGGTTTATTA-GGGATGATGGAACCGTAAAGGT 132957 |||||||| || || | || |||| ||| | ||||||||| | || || || Sbjct 370532 ATTATTGGTGAAATAC-AACGTTTCTTACGTGATGATGGATCAGTGAAAGT 370483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530613482661600