Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_031013.1 Length=34396 Score E Sequences producing significant alignments: (Bits) Value seq4 100 6e-17 >seq4 Length=425142 Score = 100 bits (110), Expect = 6e-17 Identities = 144/202 (71%), Gaps = 12/202 (6%) Strand=Plus/Plus Query 18019 AGCTAGTTTATGGAGTTGTTTATGAGCCTGATGTAGAAGATGCACACGGCGATTTTATGG 18078 |||| ||| || || |||||||| || |||||||||||| ||||||| ||| ||| Sbjct 190807 AGCTTGTTACAGGTGTCGTTTATGAACCAGATGTAGAAGATTCACACGGGGATAAAATGA 190866 Query 18079 ACGCTGAAACGATTGAAAAAGCAGCACATGGATTCATGGAAGAATATCAAAACATTGATA 18138 ||| ||| || |||||||| || || || |||||| | || ||| |||| || | Sbjct 190867 CCGCAGAAGAAATAGAAAAAGCTGCTTATACCTTTATGGAAAATTACCAACACATCGACA 190926 Query 18139 AGCAACATGATTTTAAAACGAGTGCTGGAAAA------GTTGTTGAAAGTTATGTCGCTC 18192 |||||||||| | ||| | ||||| ||| |||||||||| | | ||| Sbjct 190927 AGCAACATGA--TGAAATC----GCTGGGAAAGGGACGGTTGTTGAAAACTGGATTGCTA 190980 Query 18193 CAAGTGATATGACGGTAGGTGA 18214 |||||||||||| ||||| || Sbjct 190981 AAAGTGATATGACAGTAGGCGA 191002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109938490986220