Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_031022.1 Length=108050 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=209919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/162 (72%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 55507 TGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTACAGCGTA 55566 |||||| |||| || || | |||||||||||||| | | |||| |||||| || Sbjct 27213 TGTACGGTTAATTACATCAATTTGTTGTTCACGAGTTAATTTAATAAAGTTTACAGCATA 27272 Query 55567 CCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATCCA--AA 55624 || || ||||| || |||||||| || || || |||||||||| | |||||||| || Sbjct 27273 ACCAGATACACGAATTGTTAATTGTGGATACTTCTCAGGATGTTCCATTGCATCCATTAA 27332 Query 55625 AGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCT 55666 | | ||||| | || || || | ||||| ||| || ||| Sbjct 27333 TGTT--TCACGGTTAAATACGTTAATATTTAAGTGGTGCCCT 27372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345612263324095