Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 5e-15 >seq4 Length=425142 Score = 95.1 bits (104), Expect = 5e-15 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 52109 TATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTC 52168 |||||| || | || || ||||| |||||||| || |||||||| || || |||||||| Sbjct 259815 TATGGCCTTACCGCCTTGTCATACGCTATTCCAGTTTTATGTAGCAGATGGAAAGCTTTC 259874 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 || || || ||||| | || ||||| ||| | || |||| ||||||||||| || Sbjct 259875 TTGTCAGTTATATCAAAGAAGTGGTGACATATTCCTTGGAATTCCATTTAACATTGCAAG 259934 Query 52229 CTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATT 52285 || || | || || ||| | ||||| | | | || ||||| || || ||||| Sbjct 259935 TTACTCACTACTAACACATTTAATTGCACATGAATGCGGACTTGAAGTGGGAGAATT 259991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190083708511450