Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 >seq4 Length=425142 Score = 111 bits (122), Expect = 1e-19 Identities = 131/176 (74%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 70375 CCTT-CCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCC 70433 |||| || || |||||||| |||||||| || | ||| | |||||| ||||||||||| | Sbjct 259820 CCTTACCGCCTTGTCATACGCTATTCCAGTTTTATGTAGCAGATGGAAAGCTTTCTTGTC 259879 Query 70434 AGCTATATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATG 70493 || |||||||| | |||| |||||| || ||||| | ||||| || |||||| || Sbjct 259880 AGTTATATCAAAGAAGTGGTGACATATTCCTTGGAATTCCATTTAACATTGCAAGTTACT 259939 Query 70494 CCTTACTTACACATCTTATTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTT 70549 | |||| |||||| | ||||| ||| || || | | || || || |||||| Sbjct 259940 CACTACTAACACATTTAATTGCACATGAATGCGGACTTGAAGTGGGAGAATTTGTT 259995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335552130968215