Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010235.1_202016-07-08] 4,669 sequences; 26,353,568 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1812 150 4e-31 >seq1812 Length=13802 Score = 150 bits (166), Expect = 4e-31 Identities = 465/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| | ||||| | ||||| | Sbjct 2035 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTCATCTACGACCGCGATTTCGGC 2094 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| || || || | || || || |||||| Sbjct 2095 TACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGCTTCGCATCGACGGCAAG 2154 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| || |||||| | ||||| || || ||||| || ||| | ||| Sbjct 2155 GTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 2214 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 2215 ATTGAGCGCGTCTTGCAGTCGTACAACCTTATGTCCGAGCGCTACTTTACCCACGCCTCG 2274 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| || || || || | | Sbjct 2275 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 2333 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | || || || | || |||||||| |||||||||| ||||| ||| || Sbjct 2334 GATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTTA---AGACGTGCGCGCTCAT 2390 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| || || |||||| | | || ||||||||| |||| || || || Sbjct 2391 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTA 2450 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || ||||| || | | || || || ||| | || || || | Sbjct 2451 CATCGCCGGCACAAACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAA 2510 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 |||||| | | | || |||| | || | || || | ||||| || || | Sbjct 2511 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 2570 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || |||||||||||| | || || ||||||||| | |||||| ||||||| || Sbjct 2571 CGAGCCGTGGCACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGA 2630 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | |||| | |||||| || Sbjct 2631 GGAAGTTCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCG 2690 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||||||| | || | | || |||| ||||| | |||| Sbjct 2691 TGTCGAGGCCGCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 2745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073702165616192