Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010235.1_202016-07-08] 4,669 sequences; 26,353,568 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1812 100 5e-16 >seq1812 Length=13802 Score = 100 bits (110), Expect = 5e-16 Identities = 165/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894 |||||| || || ||||||| || || ||||| |||| || | | || ||||||| Sbjct 4135 GTCTTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCCCGCGTGCGCAAGTAGTACA 4077 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACG 203953 |||| ||||| || || ||| ||| ||||| | |||||| || | || | || || Sbjct 4076 TGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCG 4017 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 ||||| || | || ||| ||||| || || || ||||| ||| ||||| || || || Sbjct 4016 TTGGGCTC-GACAAGTGGATGTTAAGCGATTGCGACTGGTCAATG-AAGGCACCTCGGTC 3959 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | |||||| ||||| ||||| | |||||| || |||||| Sbjct 3958 GGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 3910 Score = 87.8 bits (96), Expect = 3e-12 Identities = 339/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | | || |||||||| || | || | | || Sbjct 2688 CTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTTCCTC 2629 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | |||||||||||||||||| | Sbjct 2628 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AATTCGAAGACGTCGGCGTGCCACGGCTCGA 2570 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 2569 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 2510 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | ||||| |||| | |||| Sbjct 2509 TGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTTGTGCCGGCGATGT 2450 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 2449 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 2390 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| |||| || ||| ||| |||||| | || ||||| ||| || || Sbjct 2389 TGAGCGCGCACGTCTT-AAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTG 2331 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| ||||||||| || Sbjct 2330 ACCAGGAAACAGGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 2272 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| | ||| |||| || | |||| | || || |||| ||| | || Sbjct 2271 GGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTC 2212 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | ||||| || || | ||||| | ||||| | |||||| || Sbjct 2211 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGG 2167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795108792754640