Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010235.1_202016-07-08] 4,669 sequences; 26,353,568 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1812 282 4e-71 seq4656 138 1e-27 seq2275 138 1e-27 seq2248 131 2e-25 seq1990 129 6e-25 seq1955 129 6e-25 seq1516 86.0 6e-12 >seq1812 Length=13802 Score = 282 bits (312), Expect = 4e-71 Identities = 836/1262 (66%), Gaps = 44/1262 (3%) Strand=Plus/Minus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| |||||| |||| Sbjct 3306 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 3247 Query 148592 GAGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGC--AGCCGCACAAACGCGTCG 148646 |||| ||||| | | | ||| ||||||| ||| || | || ||||||||| Sbjct 3246 GAGCTTACGCGCCTCGGGCGAA---TCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCG 3192 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 || || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 3191 GCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTC 3133 Query 148707 TC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 3132 GATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGA 3074 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGC 148822 | | ||| | | ||| |||||| | | || |||| | |||| || || Sbjct 3073 CGACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTCCTTGATGAAGCTCGG--CAACGC 3016 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| Sbjct 3015 GATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGT 2956 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| || | |||||| ||| | |||||||| || || |||| || Sbjct 2955 GCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGC 2896 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCG 148999 ||| ||||| ||||| | || ||||||||| ||||| | ||| | || | ||| Sbjct 2895 GTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCA 2836 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | |||||| | | | || | ||| ||||||| |||||| | Sbjct 2835 AAGC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 2779 Query 149060 CA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CAC 149117 || | ||| |||| ||||||| ||| |||| ||| |||||| ||| ||||| || Sbjct 2778 CAAGGCGCG-GAACTCCTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGGCAG 2721 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | ||| | ||| ||||| | || | || |||| ||| || |||||||| | ||||||| Sbjct 2720 AAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGC 2661 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGGTTG 149234 || | | ||| || || || || |||| | ||| ||| ||| |||| Sbjct 2660 GCAAAGAAGAGATCACGAGC---GCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 2604 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 2603 AGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 2544 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || |||||||||| |||| | ||||||| | || || | ||| || || Sbjct 2543 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACA 2484 Query 149352 ATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 ||||| | | ||| |||||| || | ||| |||| ||| || | ||||| Sbjct 2483 ATGCCGTTCG-AGTAGCCGTTTGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 2425 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 | | | | ||||| || ||| || ||| |||||| |||||| ||| ||||| Sbjct 2424 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTAAGCGTGT 2366 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||| ||||| || || || |||||| || | ||| || || || | | |||| Sbjct 2365 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 2306 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| ||||| ||| | || || |||||| ||||| || || | || Sbjct 2305 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACA 2246 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | | |||||||| | ||||| || ||||| | || |||||||| | |||||| | Sbjct 2245 TAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 2186 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| ||||| || ||||| || || || || ||| | || ||||||||| | Sbjct 2185 GCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 2126 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGG 149769 ||| || || ||| |||||||||| |||||| | || |||||| ||| | ||| ||| Sbjct 2125 GTTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAG---ATGACGG 2069 Query 149770 CG 149771 || Sbjct 2068 CG 2067 >seq4656 Length=88185 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 88033 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 87975 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 87974 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 87915 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 87914 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 87855 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 87854 CTTGACGAAGATTTGCAT 87837 >seq2275 Length=13961 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 451 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 393 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 392 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 333 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 332 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 273 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 272 CTTGACGAAGATTTGCAT 255 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 223 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 165 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 164 AGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTT 105 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | ||| || |||| |||| || ||||||||||| || Sbjct 104 GACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 45 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 44 CTTGACGAAGATTTGCAT 27 >seq2248 Length=48530 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 3864 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 3922 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 3923 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 3982 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 3983 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 4042 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || || || || |||| Sbjct 4043 CGTGAGGGTCTTGACAAAGATTTGCA 4068 >seq1990 Length=108331 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 52803 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 52861 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 52862 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 52921 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 52922 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 52981 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 52982 CGTAAGAGTCTTGACAAAGATTTGCCTG 53009 >seq1955 Length=114760 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 44451 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 44393 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || |||||||||||||| |||||| ||| Sbjct 44392 AGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGTCTT 44333 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 44332 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 44273 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 44272 CTTGACAAAGATCTGCAT 44255 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 44679 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 44621 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| ||||| || |||||| ||| Sbjct 44620 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT 44561 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| ||||| || Sbjct 44560 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTCAGCGT 44501 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 44500 CTTGACAAAGATCTGCAT 44483 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | ||| | | | ||||||||||||||||| Sbjct 44907 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 44849 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 44848 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 44789 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 44788 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 44729 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 44728 CTTGACAAAGATCTGCAT 44711 >seq1516 Length=215234 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/251 (70%), Gaps = 13/251 (5%) Strand=Plus/Minus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 75737 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 75679 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||| | ||| ||| | | ||| | ||| | Sbjct 75678 AATTCCTTCTCGATCTCGACGGCCTCCTTAATGATGAGCGCG---ACGGTGTCGGGG--T 75624 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 | |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 75623 GAGGCCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 75566 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 75565 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 75506 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 75505 CCAGAAGATGG 75495 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 121039 TTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG 121098 || ||||| | ||||| ||||||||| || || || |||||| ||| |||| |||||| Sbjct 74918 TTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCG 74859 Query 121099 TCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | ||||||||| | | |||| ||| ||||||||||||||| | ||| || Sbjct 74858 TCGGGCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGACAGGTCCATCTCTTC 74803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483392586353560