Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010235.1_202016-07-08] 4,669 sequences; 26,353,568 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1812 437 1e-117 seq1516 95.1 1e-14 seq782 86.0 7e-12 >seq1812 Length=13802 Score = 437 bits (484), Expect = 1e-117 Identities = 779/1126 (69%), Gaps = 12/1126 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| | ||| ||| || | ||| Sbjct 2180 TCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCGTACA 2239 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 2240 ACCTTATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 2299 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| ||||||||| || | ||||||||||| ||||| |||| Sbjct 2300 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCA 2359 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| ||||| ||| |||||||| |||||||||| |||| |||||||| | Sbjct 2360 TTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 2419 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || || ||||| || ||| | Sbjct 2420 GCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACAAACGGC-TACTCGAAC 2478 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || || ||||| |||||||| |||| ||||||||| || | |||||| |||| || ||| Sbjct 2479 GGCATTGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 2538 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| |||||||||||||| |||||||| |||||| | || Sbjct 2539 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAA 2598 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | ||||| | ||| ||| || |||||| Sbjct 2599 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTTCGCGCTCGTGATCTCTTCTTT 2658 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | |||||||| || || ||||||||| || ||| | || || |||| || Sbjct 2659 GCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCGAGGCCGCCGGCGATTGGCCTCTC 2718 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| |||| ||| ||||| | ||| ||||| ||||||| |||| | ||| Sbjct 2719 TTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAGGAGTTCCGCGCCTTG 2778 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| |||||| | ||| || | | | ||| Sbjct 2779 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGCGCAAAAGCTTTGG 2838 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||| | || || ||||||||| || |||| || | ||| |||||| ||||| Sbjct 2839 TA-CGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCTTTTATGCTCTACAAAGACGC 2897 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||||||| || || || || ||||| | ||| ||||||||||||| |||||||| || Sbjct 2898 CGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGATCAAGTCGTCGAACCTGTGCAC 2957 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || |||||||||| ||||| || || |||| || | Sbjct 2958 CGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 3017 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| |||||| | | | ||||||| || ||| ||||||| | Sbjct 3018 GTTGCCGAGCTTCATCAAGGACGGCGTGTACGACTTTAAGAAGTTGCACGAGGTCGTCAA 3077 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCG--ACCGAGGC 20070 ||||||| | || |||| ||| ||||||| |||| || |||| | ||| Sbjct 3078 GGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGA--- 3134 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 ||||| || || || | |||||||| || |||| ||||| || || || || ||||| Sbjct 3135 GGCGCAAAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGA 3194 Query 20131 CGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGG 20189 || |||||| || ||| | | ||||| ||| ||||||| ||||||||||| Sbjct 3195 CGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGTAAGCTCAACAAGC 3253 Query 20190 GCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| || | |||||||| || || | |||||||| Sbjct 3254 AAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 3299 Score = 421 bits (466), Expect = 7e-113 Identities = 789/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| |||||| Sbjct 3290 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCC 3234 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 3233 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 3175 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | |||| || | Sbjct 3174 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTG---CGCCTCGATGACGGGATAGTA 3118 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 3117 GTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 3058 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | ||||| |||||| |||| | | ||| |||| ||||| Sbjct 3057 CTTAAAGTCGTACACGCCGTCCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 2999 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||| || ||||||| Sbjct 2998 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACT 2939 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | ||||| ||||| |||| ||| |||||| |||||| ||| Sbjct 2938 TGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGTCTTTGTAGAGCATAA 2879 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| | |||| ||| ||| | | | || ||| Sbjct 2878 AAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGGGGA 2819 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 |||||| || |||| |||| || | |||| || ||| |||| | Sbjct 2818 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCCTCGC 2759 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| ||| ||||| | || |||| || || | Sbjct 2758 CATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCAATCGCCGGCGG 2699 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || ||||||||| || || || ||||| || || |||||| || || | Sbjct 2698 CCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 2639 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||||||||||| Sbjct 2638 GAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCC 2579 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 2578 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 2519 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || ||||||||||| || ||||||| | | |||||| || | Sbjct 2518 GCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTTGTGC 2459 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 2458 CGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 2399 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||| ||||| ||||| ||||| || ||||| || |||| Sbjct 2398 TCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 2339 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 2338 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 2279 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | | ||| || | ||||| || | ||||||| Sbjct 2278 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 2219 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 | ||||| |||||||||||||| ||||| ||||||| | || || |||||| ||| Sbjct 2218 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGGGCGT-TCG 2160 Query 79909 CCGACATT 79916 |||| || Sbjct 2159 GCGACCTT 2152 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 ||| || || ||||| ||||||||||||||||| || || ||||||| ||||| | ||| Sbjct 4099 GGCCCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTG 4040 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| | ||| || || | |||||| ||||| || ||||| Sbjct 4039 CATCGACGTGAGCTGCGCCATCGTTGGGCTCGACAAGTGGATGTTAAGCGATTGCGACTG 3980 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| |||||||| | || |||||| | | |||||||| | |||||| Sbjct 3979 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCA 3920 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 3919 GACGGTCTTGTAGATGGCCTTGAGATC 3893 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || |||||| || | Sbjct 3896 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGACTTGTCC 3955 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||| |||||||| || ||||| || || | || || || Sbjct 3956 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTTAACATCCACTTGTCGAGCCCA 4015 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || ||||| | ||||||||| | | || || ||||||||| Sbjct 4016 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGAGAGGACTGAAGACGGGC 4075 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 4076 ATGTACTACTTGCGCACGCGGGCC 4099 >seq1516 Length=215234 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 75482 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 75541 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 75542 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 75576 >seq782 Length=222436 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| ||||| Sbjct 28156 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 28097 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 28096 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 28057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548492786721360