Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010535.1_202016-07-08] 5,305 sequences; 27,330,976 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq527 100 5e-16 >seq527 Length=9793 Score = 100 bits (110), Expect = 5e-16 Identities = 165/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894 |||||| || || ||||||| || || ||||| |||| || | | || ||||||| Sbjct 5659 GTCTTGGTCGACGGTGAACTTGATCGCACCAACGGC-GGCCCGCGTGCGCAAGTAGTACA 5717 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG-TTTGCTCACG 203953 |||| ||||| || || ||| ||| ||||| | |||||| || | || | || || Sbjct 5718 TGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCG 5777 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 ||||| || | || ||| ||||| || || || ||||| ||| ||||| || || || Sbjct 5778 TTGGGCTC-GACAAGTGGATGTTAAGCGATTGCGACTGGTCAATG-AAGGCACCTCGGTC 5835 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | |||||| ||||| ||||| | |||||| || |||||| Sbjct 5836 GGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 5884 Score = 87.8 bits (96), Expect = 3e-12 Identities = 339/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Plus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | | || |||||||| || | || | | || Sbjct 7106 CTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTTCCTC 7165 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | |||||||||||||||||| | Sbjct 7166 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AATTCGAAGACGTCGGCGTGCCACGGCTCGA 7224 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 7225 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 7284 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | ||||| |||| | |||| Sbjct 7285 TGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTTGTGCCGGCGATGT 7344 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 7345 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 7404 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| |||| || ||| ||| |||||| | || ||||| ||| || || Sbjct 7405 TGAGCGCGCACGTCTT-AAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTG 7463 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| ||||||||| || Sbjct 7464 ACCAGGAAACAGGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 7522 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| | ||| |||| || | |||| | || || |||| ||| | || Sbjct 7523 GGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTC 7582 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | ||||| || || | ||||| | ||||| | |||||| || Sbjct 7583 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGG 7627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795102471270800