Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010535.1_202016-07-08] 5,305 sequences; 27,330,976 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq527 188 9e-43 >seq527 Length=9793 Score = 188 bits (208), Expect = 9e-43 Identities = 562/859 (65%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 6777 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 6836 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||||| ||| || ||| || ||||| | |||||||| || || || |||| Sbjct 6837 GTGCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCG 6896 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || || ||||| ||||| | || | || || || |||| | ||||| || | | Sbjct 6897 GCGTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 6956 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 || | | | || || || | || ||||| || ||||| | ||||| || | | Sbjct 6957 CAAAGCTTTTGC-GCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 7015 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 | ||| ||||| || || | | || ||| || || || | | |||||||| Sbjct 7016 CAAGGCGCGGAACTCCTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 7075 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||||| ||| | || | |||| || |||| |||||| || || || ||||||||||| Sbjct 7076 GAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGC 7135 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||||||||| ||| |||| |||| || | || || || || | |||| || Sbjct 7136 AAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 7195 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 119185 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 7196 TTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 7255 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| | |||| || || | ||| ||| ||| | ||||| ||||| || | || || Sbjct 7256 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCC 7315 Query 119246 ATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATG 119303 | || | ||| ||||| || ||| || ||| | | || | || | ||||||| Sbjct 7316 GTTCGAGTAGCCGTTTGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 7373 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 || ||| ||||| || || ||| ||||| |||||||| | | || || |||| Sbjct 7374 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAA 7433 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || || ||||| ||| |||| | | || ||||| ||| ||| | || || Sbjct 7434 ATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGA 7493 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483 || || || ||||||||||| || || | |||||| | || | | |||||| | Sbjct 7494 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGG 7553 Query 119484 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 | ||| | || ||||||| |||||| | ||||| || |||| | ||| ||||| Sbjct 7554 TTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATG 7613 Query 119544 AACATGTATTG-GGGTGTT 119561 | ||||| ||| ||| ||| Sbjct 7614 AGCATGTGTTGCGGGCGTT 7632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618394190015800