Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010535.1_202016-07-08] 5,305 sequences; 27,330,976 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq98 187 5e-42 seq453 179 8e-40 seq133 179 8e-40 seq38 176 9e-39 seq92 172 1e-37 seq229 93.3 9e-14 seq39 89.7 1e-12 seq5136 86.0 1e-11 seq162 86.0 1e-11 >seq98 Length=66423 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 122 ACCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 181 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || ||||||||||| || || ||||| || Sbjct 182 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGG 241 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 242 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 301 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 302 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 349 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||| Sbjct 12 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 71 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || |||||||| || |||| ||||| ||||| || ||||| Sbjct 72 ACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 121 >seq453 Length=12778 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 481 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 422 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||||||||| || || || || ||||||||||| || || ||||| ||| Sbjct 421 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 362 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 361 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 302 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 301 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 255 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 254 ACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 195 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 194 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 135 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || || | ||||| || ||||| | ||||| Sbjct 134 AATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATCGTATCCGACGACTCGAC 75 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 74 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 27 >seq133 Length=54030 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || ||||||||||||||||| || Sbjct 3842 ACCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 3901 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 3902 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGG 3961 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 3962 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 4021 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| ||||| ||||| ||||| | ||||| || || || |||| Sbjct 4022 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 4068 >seq38 Length=109111 Score = 176 bits (194), Expect = 9e-39 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || |||| || | || || ||||||||||||||||| || Sbjct 53660 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 53719 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 53720 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 53779 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 53780 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 53839 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | |||||| || || || ||| Sbjct 53840 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 53884 >seq92 Length=70231 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 70017 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 70076 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || ||||| | |||||||||||| || Sbjct 70077 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 70136 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 70137 AATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 70196 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 ||||| ||||||||||| ||||||| ||||| Sbjct 70197 CTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTT 70229 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 69789 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGC 69848 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 69849 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGG 69908 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | ||||| |||||||| | ||||| Sbjct 69909 AATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 69968 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 69969 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 70016 >seq229 Length=32094 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||| |||||||| | || ||| | ||||| |||||||| | ||||| ||| Sbjct 3 CCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCG 62 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| ||||| | ||||| || || |||||||| Sbjct 63 AGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 106 >seq39 Length=108978 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | || || || |||||||| |||||||| Sbjct 92442 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 92383 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || |||||||| || | ||||| || || |||||| Sbjct 92382 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTC 92341 >seq5136 Length=205 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| | || ||| | ||||| |||||||| | ||||| ||||| |||||| Sbjct 1 TCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 60 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||| ||||| || || |||||||| Sbjct 61 GTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 95 >seq162 Length=46236 Score = 86.0 bits (94), Expect = 1e-11 Identities = 432/679 (64%), Gaps = 12/679 (2%) Strand=Plus/Minus Query 273516 TTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCC 273575 ||||| || |||||| || | ||| | | |||| ||||| ||||| ||| Sbjct 34908 TTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCCTT 34849 Query 273576 ACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCA 273635 | || | | |||||| | ||||||||| | || || | | ||| || || ||| Sbjct 34848 AAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTCCA 34789 Query 273636 ATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCA 273695 ||||| || ||||| |||| | | ||||| || |||| || | ||||| Sbjct 34788 ATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCTCG 34729 Query 273696 ATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCA-TCATCCGTATCAACGAAAAC 273754 || | | ||||| |||| ||||| ||| | | || ||||| | | ||| || Sbjct 34728 ATGCTTTGCCCATCATCGTTGAGGTA-TTCGAGCACGCTGTCATCAGCGGGATGGAAGAC 34670 Query 273755 CTTTCGCGTCT--GAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTG 273812 | ||||| || ||| | |||||||| ||||| | || || ||| || Sbjct 34669 GCTACGCGTGATGGATGATACG--TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTA 34612 Query 273813 CCACCTTGCAGCCTCGAACCAAACTGACC-CTCGGGCAGTAGCCAGTTTATGTTGTTGCT 273871 ||||||||||| | || |||||| ||||| ||||| | || ||| | ||||||| Sbjct 34611 CCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCG-AGAATGTTGAGGTTGTTGGA 34553 Query 273872 ACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTG 273931 |||||| | | || |||| | ||| || || || | | || ||||| || Sbjct 34552 CCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATG 34493 Query 273932 ATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAA 273991 || || ||| ||||||| ||||| | || || | ||||| | || |||||| Sbjct 34492 GTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAA 34433 Query 273992 GTTTCGCTTGAA--TGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACG 274049 || |||||||| | || |||| ||||| || || ||||| |||||||||| | Sbjct 34432 CTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATG 34375 Query 274050 ACCGATGGAATACTGCGTTCCAAATCATACCGAGAGAACAAAATCAGTTCCTTGTCAATG 274109 || || |||||| ||| | || | ||||| | |||| ||||||| ||| Sbjct 34374 ACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATG 34315 Query 274110 AAGTCAGGGACGGGAACCTCGGGCTTCTTGTGGTCGAGCTGATTACCGGGTTCGTATGCC 274169 || || || || || |||| | |||||||||| | | ||||| || | | Sbjct 34314 AAATCCTCGATCGGGACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCT 34255 Query 274170 AACATCCACTCCTTGCGGT 274188 | ||| |||||||||| Sbjct 34254 CGGAGCCATTCCTTGCGGT 34236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046668052809470