Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-28 seq2 86.0 5e-13 >seq1 Length=970878 Score = 136 bits (150), Expect = 3e-28 Identities = 355/534 (66%), Gaps = 8/534 (1%) Strand=Plus/Plus Query 2710 TCCAAATAATCAGCCCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTA 2769 |||| ||| ||||||||||| |||| ||| | || || || ||||| || | || Sbjct 73218 TCCAGATAGTCAGCCCACCATTGCAACATGAGTTTTCGTTCTTCTAAATGTTCTGCTTTA 73277 Query 2770 TGGATATATGCCGCACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGCG 2829 || || || || || | || | ||||||||| |||||||| ||||||||||| ||| Sbjct 73278 TGAATGTAGGCTGCCCTAACGCTGTTACGCTCTTGGTGGCTCATTTGCCTCTCTACGGCG 73337 Query 2830 TCATCACTCCATAACCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGC 2889 || ||| | ||| || || ||| |||| | ||||||||||| || |||||| Sbjct 73338 TCTCTTGACCAAAGCCCGGATTCAATCAATGCACTGCAAGCCATAGTCCTGAAACCATGC 73397 Query 2890 CCACACACCTCGGTTTTAGTATCATAGCCCATCGCACGCAATGCGCTGTTTACCGTGTTT 2949 ||||| || || |||| |||| || ||||| | | | || |||| || |||||| Sbjct 73398 CCACAAACTTCAGTTTGGGTATTGTATCCCATGGTTCTAAGGGCTTTGTTGACTGTGTTT 73457 Query 2950 TCACTCATAACCTTAGTTGCGTCATGA-TCCCCCGGA--AAAAGCAGCTCTTTATCACCA 3006 ||||| || || || |||||| | | | || || | || ||||| ||||| Sbjct 73458 TCACTGAT-CGGTTTGT--CGTCATTACTAAATCCGATGAACATGAGATCTTTGCCACCA 73514 Query 3007 CTAATCTGC-TTTAACTGGTTTAATAAAATCATCGCCTGTCGACTAAGCGGAACGATATG 3065 || || ||| | || ||| || || | | | ||| || | || || | ||| Sbjct 73515 CTGAT-TGCATGTAGCTGTAACAACAATTTTTTAGATTGTTTGCTTAAAGGCACCAGATG 73573 Query 3066 TTCCTCTTTCATCTTCATGCCTCGGTACGAATAACGCACACCTTTAATTTCTTCTCGCTT 3125 |||||| || |||| ||||| | || || | | | ||| ||||| Sbjct 73574 AGGGCTTTTCATTTTTGCCCCTCTTGCTGAATATCTAACCCCAATGAGTGCTTGTCGCTC 73633 Query 3126 TGCAGGTATACGCCAAAGAGATTTATCGAAGTCGAATTCATCCCAACGTGCGAAACGTAA 3185 ||| |||||| ||| || || || | ||| || | || ||||||||| || | ||| Sbjct 73634 TGCGGGTATAGTCCATAGTGAGTTTTTGAAATCTACCTCTGACCAACGTGCAAATCTTAA 73693 Query 3186 TTCACTGGAACGCACAAAAGTTAGCAAGGAAAGCTTGACCGCAATCCGTGTCAT 3239 |||||| ||||| ||||| || || | | ||||| | ||||||| |||| || Sbjct 73694 TTCACTCGAACGTACAAATGTCAGGAGTGTAAGCTGGGTCGCAATCTGTGTTAT 73747 >seq2 Length=722220 Score = 86.0 bits (94), Expect = 5e-13 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 3829 TCAAGATACAAACCACCACCATCGGCCATTTTGTAGGTTTTGTCTTTTGGCTTTGCGGTC 3888 |||||||||| ||||||||||||||| | |||||| | || ||||||||||| || | Sbjct 221138 TCAAGATACATACCACCACCATCGGCAAGTTTGTATGACTTTTCTTTTGGCTTAGCAGAG 221079 Query 3889 TCGACCTGTCTGGCGTTGAGCTTCATTTGGGGGCA 3923 || | |||| | | | ||||||||||||||||| Sbjct 221078 TCAATTTGTCGGACTGTCAGCTTCATTTGGGGGCA 221044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37078943057008