Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 105 8e-18 seq11 96.9 4e-15 >seq4 Length=447486 Score = 105 bits (116), Expect = 8e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 145789 TAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGG 145848 |||||||| ||||| || |||| ||||| ||||| | ||||||||| || |||||| Sbjct 111698 TAGCTGGCGATGTTAAACGGCAGGCCCAGGAAGATGTCGCACGAGCGCTGATAGAGCTGG 111757 Query 145849 CAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCC 145908 |||||||| | ||| ||||||||||||||||| | | |||||| || | ||| ||| Sbjct 111758 CAGGAGAGTTTGCCGTCCGCCACGTAGAACTGGAAGAACGCGTGGCAAGGAGCCAGCGCC 111817 Query 145909 ATGGCGGGCAGGTCCGCCG-GGTTCCAGGC 145937 || || ||| | ||||| ||||||||| Sbjct 111818 ATCTCGCTCAGCT-CGCCGACGTTCCAGGC 111846 >seq11 Length=201304 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056 ||| || || || | |||| | ||||| ||||| |||| ||| | || ||||| | Sbjct 21274 CTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCGAAAT 21216 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 |||||||||||||||| || || || ||||| ||||| ||||| || |||| ||| Sbjct 21215 GCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAACCCAA 21156 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176 || | || || | | || || || | ||||| || ||||| ||| | |||| | Sbjct 21155 CCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGGACA 21096 Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236 || || || || || || | | |||||| ||||| || || | || || | | Sbjct 21095 ATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTCGCG 21036 Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| |||||||||||| ||||||| Sbjct 21035 TAAAGACCTTCTTGGTGGTCAAAAGGGGGA 21006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590029822510760